Detailed information NTG0788151

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PRJ39_RS05995
• Genome accession: NZ_CP117873
• Coordinates: 1357885..1359300 (-)
• Length: 471 a.a.
• NCBI ID: WP_091797859.1
• Uniprot ID: -
• Organism: Lysobacter enzymogenes strain Lj46
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1352885..1364300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PRJ39_RS05980 (PRJ39_05745)	-	1353775..1355481 (-)	1707	WP_394540072.1	phosphoethanolamine transferase	-
PRJ39_RS05985 (PRJ39_05750)	-	1355540..1355980 (-)	441	WP_091797853.1	pilin	-
PRJ39_RS05990 (PRJ39_05755)	-	1356824..1357279 (-)	456	WP_394540073.1	pilin	-
PRJ39_RS05995 (PRJ39_05760)	pilR	1357885..1359300 (-)	1416	WP_091797859.1	sigma-54 dependent transcriptional regulator	Regulator
PRJ39_RS06000 (PRJ39_05765)	-	1359399..1361024 (-)	1626	WP_091797862.1	PAS domain-containing sensor histidine kinase	-
PRJ39_RS06005 (PRJ39_05770)	sucC	1361390..1362556 (+)	1167	WP_074862717.1	ADP-forming succinate--CoA ligase subunit beta	-
PRJ39_RS06010 (PRJ39_05775)	sucD	1362569..1363444 (+)	876	WP_394540075.1	succinate--CoA ligase subunit alpha	-
PRJ39_RS06015 (PRJ39_05780)	-	1363697..1364071 (+)	375	WP_394540077.1	endonuclease domain-containing protein	-

Sequence

Protein

• Length: 471 a.a.
• Molecular weight: 50862.35 Da
• Isoelectric Point: 7.1658

>NTDB_id=788151 PRJ39_RS05995 WP_091797859.1 1357885..1359300(-) (pilR) [Lysobacter enzymogenes strain Lj46]
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASGLNEARSQLLRNRYDLCLTDMRLPDGSGMDLVAEISQKHPNTPVA
MITAFGNVEAAVEALKAGAFDFVAKPVDLSVLRDLVRHALELHETRRTASEAVGSRLYGESPAMIKLRQTIGKVARSQAP
VYIAGESGVGKELVARTIHSEGGRADGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAADGGTLFLDEVAE
LPLAMQVKLLRAIQEKSIRPVGAQAEVTVDVRILSATHKDLAALVAEGRFRQDLYYRINVIELRVPPLRERLDDLPGLAA
KILHRLAGNQGRPVPRLGDDALEALRAYNFPGNVRELENILERALALAEGEVLSAGDLRLPRLATQAPPGSVAGAAPPPA
GQAVPPGAVDPRTLNPRDTATSALPSYIEEIERAAIQQALQENRYNKTRTAAALGITFRALRYKLKKLGID

Nucleotide

• Length: 1416 bp

>NTDB_id=788151 PRJ39_RS05995 WP_091797859.1 1357885..1359300(-) (pilR) [Lysobacter enzymogenes strain Lj46]
ATGGCTGAAACCCGTAGTGCATTGGTAGTCGACGACGAACGCGATATCCGCGAGTTGCTCGTCATGACGTTGGGCCGCAT
GGGCCTGCGTTGCGATACCGCGTCGGGCCTCAACGAGGCCCGCAGCCAGCTGCTGCGCAATCGTTACGATCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCTCGGGCATGGACCTGGTCGCCGAGATCAGCCAGAAGCATCCCAACACGCCGGTGGCG
ATGATCACCGCCTTCGGCAACGTCGAAGCCGCGGTGGAAGCGCTCAAGGCCGGCGCGTTCGACTTCGTCGCCAAGCCGGT
CGACCTGTCGGTGCTGCGCGACCTGGTCCGCCACGCGCTGGAGCTGCACGAGACCCGCCGCACCGCCAGCGAAGCGGTCG
GTTCGCGCCTGTACGGCGAATCGCCGGCGATGATCAAGCTGCGCCAGACCATCGGCAAGGTCGCGCGCAGCCAGGCGCCG
GTGTACATCGCCGGCGAATCGGGCGTGGGCAAGGAACTGGTCGCGCGCACCATCCATTCCGAGGGCGGCCGCGCCGACGG
GCCGTTCGTGCCGGTCAACTGCGGCGCGATCCCGGCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCT
TCACCGGCGCCCACGCCGACAAGCCCGGCCTGTTCCAGGCCGCCGACGGCGGCACCTTGTTCCTCGACGAAGTCGCCGAG
CTGCCGCTGGCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGATCCGCCCGGTCGGCGCCCAGGCCGAGGT
GACGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGCGCTGGTCGCCGAAGGCCGCTTCCGCCAGGACC
TGTACTACCGAATCAACGTGATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGCCTGGACGACCTGCCCGGCCTGGCCGCG
AAGATCCTGCACCGCCTGGCCGGCAACCAGGGCCGGCCGGTGCCGCGGCTGGGCGACGACGCGCTCGAAGCGCTGCGCGC
CTACAACTTTCCCGGCAACGTGCGCGAACTGGAGAACATCCTCGAACGCGCCCTGGCCCTGGCCGAAGGCGAAGTGCTCA
GCGCCGGCGACCTGCGCCTGCCGCGCCTGGCCACCCAGGCCCCGCCGGGCAGCGTCGCCGGCGCCGCGCCGCCGCCCGCC
GGCCAGGCCGTGCCGCCGGGCGCGGTCGATCCGCGCACGCTGAACCCGCGCGACACCGCCACCAGCGCCCTGCCGTCCTA
CATCGAAGAAATCGAGCGCGCCGCGATCCAGCAGGCCCTGCAGGAAAACCGCTACAACAAGACCCGCACCGCGGCGGCGC
TGGGCATCACCTTCCGGGCGCTGCGCTACAAGCTCAAGAAGCTCGGGATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

• Bacterial regulatory protein, Fis family (HTH_8) (428-468)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.675	99.363	0.633
pilR	Acinetobacter baumannii strain A118	48.428	100	0.49