Detailed information NTG0788069

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PO845_RS17255
• Genome accession: NZ_CP117857
• Coordinates: 3504413..3505576 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain PT4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3499413..3510576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PO845_RS17225 (PO845_17230)	-	3499678..3500097 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
PO845_RS17230 (PO845_17235)	comFC	3500171..3500860 (-)	690	WP_196493397.1	phosphoribosyltransferase family protein	Machinery gene
PO845_RS17235 (PO845_17240)	-	3500866..3501150 (-)	285	WP_003151389.1	competence protein ComFB	-
PO845_RS17240 (PO845_17245)	comFA	3501208..3502593 (-)	1386	WP_015418335.1	DEAD/DEAH box helicase	Machinery gene
PO845_RS17245 (PO845_17250)	-	3502701..3503549 (-)	849	WP_015418336.1	DegV family protein	-
PO845_RS17250 (PO845_17255)	degU	3503647..3504336 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PO845_RS17255 (PO845_17260)	degS	3504413..3505576 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
PO845_RS17260 (PO845_17265)	-	3505799..3506446 (+)	648	WP_003151384.1	YigZ family protein	-
PO845_RS17265 (PO845_17270)	-	3506451..3507665 (+)	1215	WP_015418337.1	LCP family protein	-
PO845_RS17270 (PO845_17275)	-	3507755..3508831 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
PO845_RS17275 (PO845_17280)	-	3508964..3510160 (-)	1197	WP_061860924.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=788069 PO845_RS17255 WP_007407484.1 3504413..3505576(-) (degS) [Bacillus velezensis strain PT4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=788069 PO845_RS17255 WP_007407484.1 3504413..3505576(-) (degS) [Bacillus velezensis strain PT4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951