Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   Q6378_RS02675 Genome accession   NZ_CP130889
Coordinates   519855..520466 (-) Length   203 a.a.
NCBI ID   WP_050169631.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain NJ209649     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 514855..525466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6378_RS02645 (Q6378_02645) dut 516110..516562 (-) 453 WP_103195211.1 dUTP diphosphatase -
  Q6378_RS02650 (Q6378_02650) - 516728..517435 (+) 708 Protein_518 AzlC family ABC transporter permease -
  Q6378_RS02655 (Q6378_02655) - 517432..517740 (+) 309 WP_010951048.1 AzlD family protein -
  Q6378_RS02660 (Q6378_02660) pilL 517810..518286 (-) 477 WP_203004379.1 PilX family type IV pilin Machinery gene
  Q6378_RS02665 (Q6378_02665) pilK 518288..518899 (-) 612 WP_003687918.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  Q6378_RS02670 (Q6378_02670) pilJ 518878..519858 (-) 981 WP_010951046.1 PilW family protein Machinery gene
  Q6378_RS02675 (Q6378_02675) pilV 519855..520466 (-) 612 WP_050169631.1 type IV pilus modification protein PilV Regulator
  Q6378_RS02680 (Q6378_02680) pilH 520498..521163 (-) 666 WP_047918678.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  Q6378_RS02685 (Q6378_02685) dnaB 521318..522724 (-) 1407 WP_003690896.1 replicative DNA helicase -
  Q6378_RS02690 (Q6378_02690) - 522888..523468 (+) 581 Protein_526 superoxide dismutase -
  Q6378_RS02695 (Q6378_02695) - 523698..524207 (-) 510 WP_003687909.1 isoprenylcysteine carboxyl methyltransferase family protein -
  Q6378_RS02700 (Q6378_02700) - 524537..524869 (-) 333 WP_003687908.1 hypothetical protein -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22076.13 Da        Isoelectric Point: 4.8546

>NTDB_id=787922 Q6378_RS02675 WP_050169631.1 519855..520466(-) (pilV) [Neisseria gonorrhoeae strain NJ209649]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDLDSNKKN
YSLYMGKQTLSAVDGKFMLDAEKSKAQLAEEQLKRFSHELKNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=787922 Q6378_RS02675 WP_050169631.1 519855..520466(-) (pilV) [Neisseria gonorrhoeae strain NJ209649]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAAACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTTGGACAGCAACAAGAAAAAC
TATAGTCTTTACATGGGAAAACAGACACTATCAGCTGTGGATGGTAAGTTTATGCTTGATGCCGAGAAAAGTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTCATGAGCTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACGCCG
TCTGCAAGGATTCGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAAGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

89.372

100

0.911
  pilV/pilI Neisseria gonorrhoeae MS11

83.744

100

0.837