Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG328_RS28035 Genome accession   NZ_CP130730
Coordinates   6138331..6139389 (-) Length   352 a.a.
NCBI ID   WP_051801604.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01518     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6133331..6144389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG328_RS28010 (OG328_27950) cseB 6133768..6134475 (-) 708 WP_405842755.1 two-component system response regulator CseB -
  OG328_RS28015 (OG328_27955) - 6134662..6135381 (-) 720 WP_405842757.1 hypothetical protein -
  OG328_RS28020 (OG328_27960) - 6135369..6135908 (-) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG328_RS28025 (OG328_27965) - 6136250..6137179 (-) 930 WP_405842759.1 A/G-specific adenine glycosylase -
  OG328_RS28030 (OG328_27970) - 6137472..6138302 (+) 831 WP_405842761.1 hypothetical protein -
  OG328_RS28035 (OG328_27975) disA 6138331..6139389 (-) 1059 WP_051801604.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG328_RS28040 (OG328_27980) radA/sms 6139527..6140936 (-) 1410 WP_390166339.1 DNA repair protein RadA Machinery gene
  OG328_RS28045 (OG328_27985) - 6141135..6142835 (+) 1701 WP_405842763.1 BACON domain-containing protein -
  OG328_RS28050 (OG328_27990) - 6142840..6143697 (-) 858 WP_405842765.1 hypothetical protein -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38048.70 Da        Isoelectric Point: 4.9024

>NTDB_id=787549 OG328_RS28035 WP_051801604.1 6138331..6139389(-) (disA) [Streptomyces sp. NBC_01518]
MRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLRELCKLDGGIVVSSDLSKILRAG
VQLVPDPNIPTEETGTRHRTADRVSKQVAYPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVVELGTDGRLLALQLEELIAGVEPERELVVRDYVPEPTAKRS
RTVNEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAIIDRLVEHFGGLQKLLAASVDD
LQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=787549 OG328_RS28035 WP_051801604.1 6138331..6139389(-) (disA) [Streptomyces sp. NBC_01518]
ATGCGCGCCTCACTGAGCGCCGTTGCCCCCGGCACGGCCCTCCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACGGG
CGGCCTCATCGTGCTCGGCTCCGACAAGACCGTAGAAGCGATGTGCACAGGCGGTTTCATCCTGGACGTGGAGTTCACGG
CCACGCGCCTACGCGAACTCTGCAAGCTGGACGGCGGCATCGTAGTGTCGTCCGACCTCTCGAAGATCCTCCGAGCGGGC
GTCCAACTGGTCCCGGACCCCAACATCCCCACCGAAGAGACAGGCACCCGCCACCGCACGGCGGACCGGGTCAGCAAACA
GGTCGCCTACCCAGTGGTCTCCGTCTCCCAGTCCATGCGCCTGATCGCCCTCTACGTAGACGGCCAACGCCGCGTACTGG
AGGACTCGGCGGCGATCCTGTCCCGAGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTG
GCGGGAACGCTCTCGGCCCTGGAGATCGAGGACCTGGTGACGGTCCGAGACGTATCGGCAGTGGTCCAACGTCTCGAAAT
GGTCCGCCTGATCGCGACCGAGATCGCCGAGTACGTAGTGGAGTTGGGCACAGACGGCCGCCTACTCGCCCTCCAGCTGG
AGGAGTTGATCGCGGGCGTGGAGCCGGAACGCGAACTAGTAGTACGCGACTACGTCCCCGAGCCCACGGCAAAACGCTCC
CGCACGGTGAACGAGGCCCTGGCCGAACTGGACGCCCTCTCCCACGCGGAACTCCTCGAACTCCCCACCGTGGCCCGCGC
GTTGGGCTACACCGGCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCCCGAGGCTTCCGCCTCCTGGCCAAGGTCCCGC
GCCTCCCCGGCGCGATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTCCAGAAACTCCTGGCGGCAAGCGTCGACGAC
CTCCAGACAGTGGACGGCGTAGGCGAGGCAAGGGCACGCAGCGTACGAGAGGGCCTCTCCCGCCTGGCGGAGTCCTCAAT
CCTGGAACGCTACGTGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(133-275)

Helix-hairpin-helix motif (HHH_2)

(302-337)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(16-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

98.295

0.449