Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG742_RS19540 Genome accession   NZ_CP130727
Coordinates   4411974..4413098 (+) Length   374 a.a.
NCBI ID   WP_266830670.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00828     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4406974..4418098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG742_RS19525 (OG742_19490) - 4407553..4408392 (+) 840 WP_385749706.1 hypothetical protein -
  OG742_RS19530 (OG742_19495) - 4408426..4410285 (-) 1860 WP_405907299.1 BACON domain-containing protein -
  OG742_RS19535 (OG742_19500) radA/sms 4410493..4411902 (+) 1410 WP_266456941.1 DNA repair protein RadA Machinery gene
  OG742_RS19540 (OG742_19505) disA 4411974..4413098 (+) 1125 WP_266830670.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG742_RS19545 (OG742_19510) - 4413194..4414021 (-) 828 WP_405907300.1 hypothetical protein -
  OG742_RS19550 (OG742_19515) - 4414366..4415280 (+) 915 WP_266456949.1 A/G-specific adenine glycosylase -
  OG742_RS19555 (OG742_19520) - 4415569..4416120 (+) 552 WP_266456951.1 SigE family RNA polymerase sigma factor -
  OG742_RS19560 (OG742_19525) - 4416240..4416848 (+) 609 WP_405907301.1 hypothetical protein -
  OG742_RS19565 (OG742_19530) cseB 4416888..4417604 (+) 717 WP_405907302.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40147.92 Da        Isoelectric Point: 5.0095

>NTDB_id=787434 OG742_RS19540 WP_266830670.1 4411974..4413098(+) (disA) [Streptomyces sp. NBC_00828]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELHALTHAELLELPTVARALGYTGSPEALDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=787434 OG742_RS19540 WP_266830670.1 4411974..4413098(+) (disA) [Streptomyces sp. NBC_00828]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACCGGAGGACTCATCGTGC
TCGGGTCCGACAAGACCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACCATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGACTTCACGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGCCGTGTCCTCGAAGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCCCTCGAGATCGAGGACCTGGTCACGGTCCGCGATGTCTCGGCGGTGGCCCAGCGACTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGGCGCCTTCTCGCGCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAACCCGAGCGTGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGAGCTCCACGCGCTCACCCACGCCGAGCTGCTCGAACTCCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTACCGCCTCCTCGCCAAGGTGCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTCCGCGAGGGTCTGTCGCGGCTGGCGGAGTCTTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433