Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   PSR14_RS21845 Genome accession   NZ_CP117702
Coordinates   4139154..4139948 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus sp. A01H     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4134154..4144948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSR14_RS21820 (PSR14_21805) yqiS 4134388..4135287 (-) 900 WP_000763079.1 phosphate butyryltransferase -
  PSR14_RS21825 (PSR14_21810) - 4135483..4137555 (-) 2073 WP_000811008.1 sigma-54-dependent Fis family transcriptional regulator -
  PSR14_RS21830 (PSR14_21815) - 4137692..4137925 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  PSR14_RS21835 (PSR14_21820) - 4137975..4138703 (-) 729 Protein_4250 glycerophosphodiester phosphodiesterase -
  PSR14_RS21840 (PSR14_21825) - 4138754..4138900 (+) 147 WP_001247671.1 YycC family protein -
  PSR14_RS21845 (PSR14_21830) spo0A 4139154..4139948 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  PSR14_RS21850 (PSR14_21835) spoIVB 4140236..4141534 (-) 1299 WP_098487580.1 SpoIVB peptidase -
  PSR14_RS21855 (PSR14_21840) recN 4141653..4143392 (-) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  PSR14_RS21860 (PSR14_21845) argR 4143659..4144108 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=787140 PSR14_RS21845 WP_014297988.1 4139154..4139948(-) (spo0A) [Bacillus sp. A01H]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=787140 PSR14_RS21845 WP_014297988.1 4139154..4139948(-) (spo0A) [Bacillus sp. A01H]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGTCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822