Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   Q5R05_RS06030 Genome accession   NZ_CP130703
Coordinates   1165933..1167186 (-) Length   417 a.a.
NCBI ID   WP_135197532.1    Uniprot ID   -
Organism   Leuconostoc carnosum strain AMS1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160933..1172186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q5R05_RS06025 (Q5R05_06025) - 1164140..1165855 (-) 1716 WP_135197531.1 proline--tRNA ligase -
  Q5R05_RS06030 (Q5R05_06030) eeP 1165933..1167186 (-) 1254 WP_135197532.1 RIP metalloprotease RseP Regulator
  Q5R05_RS06035 (Q5R05_06035) - 1167194..1167988 (-) 795 WP_014974497.1 phosphatidate cytidylyltransferase -
  Q5R05_RS06040 (Q5R05_06040) - 1167992..1168771 (-) 780 WP_014974498.1 isoprenyl transferase -
  Q5R05_RS06045 (Q5R05_06045) glmS 1168883..1170688 (-) 1806 WP_135197533.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -

Sequence

Protein


Download         Length: 417 a.a.        Molecular weight: 45442.76 Da        Isoelectric Point: 6.5928

>NTDB_id=786633 Q5R05_RS06030 WP_135197532.1 1165933..1167186(-) (eeP) [Leuconostoc carnosum strain AMS1]
MNLTAIISFIFVFGVLVTVHEFGHFFIAKRSGVLVREFAIGMGPKLLSWNRNHTAYTIRILPVGGYVRMAGMDETADLDA
GQRLMLEFNAQQHVTTLDTRVEEAHDGVPFQVDSFDLSDALTLTGYLNNAEELTTIVVDHDATIIEQNGIEVQIAPRDTW
FQSAPLFKRAMINIAGPLMNFILAFIVFSGLGFAAPSVTLNEAVVGGVQNNMPAKQAGLQADDKIRSIDGQDTKSWQDVT
ERISAANGKQLTFVISRQGQQKRVDVTPKTVKIDGVNSTLIGITAKTHTNITARIQYGFVTTGMTIQQVWHALTHLFTGG
FSLDKLGGPVSIARETSSVARIGFLSILAFMAMLSINLGIMNLIPIPALDGGKLILNIIEGILRRPLPSIIENTVTIVGA
VFLIVLMIAVTINDLLR

Nucleotide


Download         Length: 1254 bp        

>NTDB_id=786633 Q5R05_RS06030 WP_135197532.1 1165933..1167186(-) (eeP) [Leuconostoc carnosum strain AMS1]
ATGAATTTAACTGCAATTATTTCGTTTATATTTGTTTTTGGTGTCTTGGTCACAGTTCACGAGTTTGGTCATTTTTTCAT
TGCCAAACGGTCGGGTGTTTTGGTGCGTGAATTTGCGATAGGGATGGGGCCAAAACTATTAAGTTGGAATCGTAACCATA
CAGCATACACGATTCGTATTTTACCAGTTGGCGGCTATGTACGTATGGCTGGCATGGATGAAACAGCGGACTTAGATGCT
GGTCAAAGATTAATGCTTGAATTTAATGCACAACAACATGTTACGACATTAGATACACGTGTTGAAGAAGCACATGATGG
CGTACCTTTTCAAGTAGACTCATTTGATTTGAGTGATGCTTTAACATTAACAGGTTATTTAAATAACGCTGAAGAATTAA
CCACAATAGTGGTGGATCATGATGCAACAATAATTGAACAAAATGGTATTGAAGTACAAATAGCACCACGTGATACTTGG
TTTCAAAGTGCGCCACTATTCAAACGTGCGATGATTAACATTGCCGGGCCATTAATGAATTTTATTTTGGCCTTTATCGT
ATTTTCCGGACTTGGTTTTGCTGCACCTAGCGTGACATTAAATGAAGCGGTAGTTGGTGGTGTGCAAAATAATATGCCTG
CTAAACAAGCTGGATTACAAGCAGATGATAAAATTAGATCTATTGATGGTCAAGACACAAAATCATGGCAAGATGTCACA
GAACGTATTAGTGCTGCCAATGGGAAACAACTAACATTTGTGATTTCACGTCAAGGCCAACAGAAACGAGTTGACGTCAC
ACCTAAAACTGTTAAAATAGATGGTGTTAATTCGACGTTGATTGGTATAACAGCTAAAACGCATACGAATATCACTGCGC
GCATTCAATATGGGTTTGTTACCACTGGGATGACTATCCAACAAGTATGGCATGCCTTAACACATTTATTTACCGGTGGC
TTTAGCTTGGATAAGTTAGGTGGTCCGGTTTCAATTGCCAGAGAAACATCTAGTGTCGCACGGATTGGATTCTTAAGTAT
TTTAGCTTTTATGGCTATGCTATCAATTAATCTAGGTATAATGAACTTGATACCTATACCGGCACTAGATGGTGGGAAGT
TAATCTTAAATATCATTGAAGGTATTTTACGTCGCCCATTACCTTCAATTATTGAAAATACAGTAACCATTGTTGGCGCA
GTATTTTTGATTGTGCTGATGATTGCTGTTACAATTAATGATTTATTGAGATGA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(204-257)

Peptidase family M50 (Peptidase_M50)

(9-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

40.972

100

0.424
  eeP Streptococcus thermophilus LMD-9

40.972

100

0.424