Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   Q4V64_RS29890 Genome accession   NZ_CP130630
Coordinates   6625412..6626536 (-) Length   374 a.a.
NCBI ID   WP_124440171.1    Uniprot ID   -
Organism   Streptomyces sp. NL15-2K     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6620412..6631536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q4V64_RS29865 (Q4V64_29860) - 6621425..6622006 (+) 582 WP_253266950.1 hypothetical protein -
  Q4V64_RS29870 (Q4V64_29865) - 6621979..6622989 (+) 1011 WP_253266949.1 sensor histidine kinase -
  Q4V64_RS29875 (Q4V64_29870) - 6622986..6623645 (+) 660 WP_124440174.1 response regulator transcription factor -
  Q4V64_RS29880 (Q4V64_29875) - 6623649..6624290 (-) 642 WP_172629201.1 phosphatase PAP2 family protein -
  Q4V64_RS29885 (Q4V64_29880) - 6624466..6625314 (+) 849 WP_124440172.1 hypothetical protein -
  Q4V64_RS29890 (Q4V64_29885) disA 6625412..6626536 (-) 1125 WP_124440171.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  Q4V64_RS29895 (Q4V64_29890) radA 6626618..6628027 (-) 1410 WP_124440170.1 DNA repair protein RadA Machinery gene
  Q4V64_RS29900 (Q4V64_29895) - 6628269..6630041 (+) 1773 WP_124440169.1 hypothetical protein -
  Q4V64_RS29905 (Q4V64_29900) - 6630098..6630964 (-) 867 WP_124440168.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40089.83 Da        Isoelectric Point: 5.0064

>NTDB_id=786283 Q4V64_RS29890 WP_124440171.1 6625412..6626536(-) (disA) [Streptomyces sp. NL15-2K]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTPLRDGLERVLRGNTGGLIVLGSDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALSELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=786283 Q4V64_RS29890 WP_124440171.1 6625412..6626536(-) (disA) [Streptomyces sp. NL15-2K]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGCCCCTGCGCGACGGCCTCGAGCGAGTCCTGCGTGGCAACACCGGCGGCCTCATCGTGC
TCGGCTCCGACAAGACGGTCGAAACGATGTGTACGGGCGGATTCGTCCTGGATGTCGAGTTCACCGCGACGCGACTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCCTCCGACCTGTCGAAGATCCTCCGGGCGGGCGTCCAGCTGCTCCC
CGACCCGACGATCCCGACCGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGCCTGATCGCGCTGTACGTCGACGGCCACCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCTCGGCCGTGGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTCGGCACGGACGGGCGGCTTCTGGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTGGTCGTCCGGGACTACGTCCCCGAACCCACGGCCAAGCGCTCCCGCACGGTCGAGGA
AGCACTGTCAGAGCTCGACGCCCTCACCCACGCGGAGCTCCTCGAACTGCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCTGCCAGCGTGGATGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCCCGGGCGCGGAGCGTGCGGGAGGGGCTGTCGCGACTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444