Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | PSC74_RS02330 | Genome accession | NZ_CP117470 |
| Coordinates | 445818..446138 (-) | Length | 106 a.a. |
| NCBI ID | WP_017410999.1 | Uniprot ID | A0A1V2F1S1 |
| Organism | Aeromonas hydrophila strain 516 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 440818..451138
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSC74_RS02310 (PSC74_02310) | - | 441139..441816 (-) | 678 | WP_135319052.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| PSC74_RS02315 (PSC74_02315) | - | 442157..443128 (+) | 972 | WP_135319053.1 | response regulator | - |
| PSC74_RS02320 (PSC74_02320) | - | 443201..444598 (-) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| PSC74_RS02325 (PSC74_02325) | galU | 444812..445723 (-) | 912 | WP_029305299.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| PSC74_RS02330 (PSC74_02330) | comEA | 445818..446138 (-) | 321 | WP_017410999.1 | ComEA family DNA-binding protein | Machinery gene |
| PSC74_RS02335 (PSC74_02335) | cysQ | 446306..447076 (+) | 771 | WP_167824862.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| PSC74_RS02340 (PSC74_02340) | - | 447157..447453 (-) | 297 | WP_135319055.1 | YciI family protein | - |
| PSC74_RS02345 (PSC74_02345) | - | 447479..448030 (-) | 552 | WP_024946223.1 | septation protein A | - |
| PSC74_RS02350 (PSC74_02350) | - | 448135..449640 (-) | 1506 | WP_135319056.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| PSC74_RS02355 (PSC74_02355) | trhA | 449865..450500 (+) | 636 | WP_016351856.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11210.05 Da Isoelectric Point: 9.5773
>NTDB_id=785886 PSC74_RS02330 WP_017410999.1 445818..446138(-) (comEA) [Aeromonas hydrophila strain 516]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTANINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTANINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=785886 PSC74_RS02330 WP_017410999.1 445818..446138(-) (comEA) [Aeromonas hydrophila strain 516]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAATATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCCCAGGCCATCGTCGATTACCGTGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAATATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCCCAGGCCATCGTCGATTACCGTGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
52.727 |
100 |
0.547 |
| comEA | Vibrio cholerae strain A1552 |
52.727 |
100 |
0.547 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.918 |
92.453 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.319 |
65.094 |
0.406 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |