Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSH60_RS27120 Genome accession   NZ_CP117456
Coordinates   5896162..5896569 (-) Length   135 a.a.
NCBI ID   WP_010207217.1    Uniprot ID   -
Organism   Pseudomonas simiae strain FP1885     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5891162..5901569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSH60_RS27105 (PSH60_27100) - 5893165..5895216 (-) 2052 WP_010207214.1 methyl-accepting chemotaxis protein -
  PSH60_RS27110 (PSH60_27105) - 5895213..5895737 (-) 525 WP_010207215.1 chemotaxis protein CheW -
  PSH60_RS27115 (PSH60_27110) pilH 5895750..5896115 (-) 366 WP_010207216.1 twitching motility response regulator PilH -
  PSH60_RS27120 (PSH60_27115) pilG 5896162..5896569 (-) 408 WP_010207217.1 twitching motility response regulator PilG Regulator
  PSH60_RS27125 (PSH60_27120) gshB 5896809..5897762 (+) 954 WP_010207218.1 glutathione synthase -
  PSH60_RS27130 (PSH60_27125) - 5897840..5898745 (+) 906 WP_010207219.1 energy transducer TonB -
  PSH60_RS27135 (PSH60_27130) - 5898813..5899382 (+) 570 WP_010207221.1 YqgE/AlgH family protein -
  PSH60_RS27140 (PSH60_27135) ruvX 5899382..5899819 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  PSH60_RS27145 (PSH60_27140) pyrR 5899901..5900407 (+) 507 WP_010207223.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSH60_RS27150 (PSH60_27145) - 5900432..5901436 (+) 1005 WP_010207224.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14892.38 Da        Isoelectric Point: 7.3841

>NTDB_id=785597 PSH60_RS27120 WP_010207217.1 5896162..5896569(-) (pilG) [Pseudomonas simiae strain FP1885]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKDELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=785597 PSH60_RS27120 WP_010207217.1 5896162..5896569(-) (pilG) [Pseudomonas simiae strain FP1885]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAGACGATCCGCCGCACCGCTGAAACTTTGTT
GAAGAATGTGGGATGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTCGATCATCACCCGCACA
TTATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGTTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATTGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGACGAACTGCTGGGTGCGATCAAGGCCTACGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659
  vicR Streptococcus mutans UA159

38.889

93.333

0.363