Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSH76_RS28450 Genome accession   NZ_CP117447
Coordinates   6254455..6254862 (-) Length   135 a.a.
NCBI ID   WP_014720321.1    Uniprot ID   A0A0R3C615
Organism   Pseudomonas sp. FP215     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6249455..6259862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSH76_RS28435 (PSH76_28425) - 6251459..6253510 (-) 2052 WP_032894736.1 methyl-accepting chemotaxis protein -
  PSH76_RS28440 (PSH76_28430) - 6253507..6254031 (-) 525 WP_305493296.1 chemotaxis protein CheW -
  PSH76_RS28445 (PSH76_28435) pilH 6254043..6254408 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  PSH76_RS28450 (PSH76_28440) pilG 6254455..6254862 (-) 408 WP_014720321.1 twitching motility response regulator PilG Regulator
  PSH76_RS28455 (PSH76_28445) gshB 6255101..6256054 (+) 954 WP_003195061.1 glutathione synthase -
  PSH76_RS28460 (PSH76_28450) - 6256132..6257037 (+) 906 WP_032894731.1 energy transducer TonB -
  PSH76_RS28465 (PSH76_28455) - 6257098..6257667 (+) 570 WP_032894725.1 YqgE/AlgH family protein -
  PSH76_RS28470 (PSH76_28460) ruvX 6257667..6258104 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  PSH76_RS28475 (PSH76_28465) pyrR 6258253..6258759 (+) 507 WP_032894723.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSH76_RS28480 (PSH76_28470) - 6258784..6259788 (+) 1005 WP_014720325.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14924.48 Da        Isoelectric Point: 7.3841

>NTDB_id=785348 PSH76_RS28450 WP_014720321.1 6254455..6254862(-) (pilG) [Pseudomonas sp. FP215]
MEQHSNALKVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=785348 PSH76_RS28450 WP_014720321.1 6254455..6254862(-) (pilG) [Pseudomonas sp. FP215]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCCCGTATTGTCGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAA
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGGGCGATCAAGGCCTATGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0R3C615

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72

92.593

0.667
  vicR Streptococcus mutans UA159

38.889

93.333

0.363