Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSH96_RS27450 Genome accession   NZ_CP117436
Coordinates   6045128..6045535 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. FP2338     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6040128..6050535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSH96_RS27435 (PSH96_27430) - 6042131..6044182 (-) 2052 WP_305456359.1 methyl-accepting chemotaxis protein -
  PSH96_RS27440 (PSH96_27435) - 6044179..6044703 (-) 525 WP_305456361.1 chemotaxis protein CheW -
  PSH96_RS27445 (PSH96_27440) pilH 6044716..6045081 (-) 366 WP_017139442.1 twitching motility response regulator PilH -
  PSH96_RS27450 (PSH96_27445) pilG 6045128..6045535 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  PSH96_RS27455 (PSH96_27450) gshB 6045775..6046728 (+) 954 WP_056857702.1 glutathione synthase -
  PSH96_RS27460 (PSH96_27455) - 6046806..6047711 (+) 906 WP_305456364.1 energy transducer TonB -
  PSH96_RS27465 (PSH96_27460) - 6047922..6048491 (+) 570 WP_017139445.1 YqgE/AlgH family protein -
  PSH96_RS27470 (PSH96_27465) ruvX 6048491..6048928 (+) 438 WP_003213744.1 Holliday junction resolvase RuvX -
  PSH96_RS27475 (PSH96_27470) pyrR 6049011..6049517 (+) 507 WP_056857700.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=785072 PSH96_RS27450 WP_010564379.1 6045128..6045535(-) (pilG) [Pseudomonas sp. FP2338]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=785072 PSH96_RS27450 WP_010564379.1 6045128..6045535(-) (pilG) [Pseudomonas sp. FP2338]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCAAAAACGATCCGCCGCACGGCCGAGACGCTGTT
GAAGAACGTGGGCTGCGATGTGATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCGTCCAAAGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCAATCAAGGCTTACGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363