Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSH95_RS26405 Genome accession   NZ_CP117433
Coordinates   5659331..5659738 (-) Length   135 a.a.
NCBI ID   WP_010207217.1    Uniprot ID   -
Organism   Pseudomonas simiae strain FP55     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5654331..5664738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSH95_RS26390 (PSH95_26385) - 5656334..5658385 (-) 2052 WP_010207214.1 methyl-accepting chemotaxis protein -
  PSH95_RS26395 (PSH95_26390) - 5658382..5658906 (-) 525 WP_010207215.1 chemotaxis protein CheW -
  PSH95_RS26400 (PSH95_26395) pilH 5658919..5659284 (-) 366 WP_010207216.1 twitching motility response regulator PilH -
  PSH95_RS26405 (PSH95_26400) pilG 5659331..5659738 (-) 408 WP_010207217.1 twitching motility response regulator PilG Regulator
  PSH95_RS26410 (PSH95_26405) gshB 5659978..5660931 (+) 954 WP_010207218.1 glutathione synthase -
  PSH95_RS26415 (PSH95_26410) - 5661009..5661914 (+) 906 WP_010207219.1 energy transducer TonB -
  PSH95_RS26420 (PSH95_26415) - 5661982..5662551 (+) 570 WP_010207221.1 YqgE/AlgH family protein -
  PSH95_RS26425 (PSH95_26420) ruvX 5662551..5662988 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  PSH95_RS26430 (PSH95_26425) pyrR 5663070..5663576 (+) 507 WP_010207223.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSH95_RS26435 (PSH95_26430) - 5663601..5664605 (+) 1005 WP_010207224.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14892.38 Da        Isoelectric Point: 7.3841

>NTDB_id=784998 PSH95_RS26405 WP_010207217.1 5659331..5659738(-) (pilG) [Pseudomonas simiae strain FP55]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKDELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=784998 PSH95_RS26405 WP_010207217.1 5659331..5659738(-) (pilG) [Pseudomonas simiae strain FP55]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAGACGATCCGCCGCACCGCTGAAACTTTGTT
GAAGAATGTGGGATGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTCGATCATCACCCGCACA
TTATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGTTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATTGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGACGAACTGCTGGGTGCGATCAAGGCCTACGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659
  vicR Streptococcus mutans UA159

38.889

93.333

0.363