Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   Q3V57_RS05930 Genome accession   NZ_CP130525
Coordinates   1241178..1242464 (+) Length   428 a.a.
NCBI ID   WP_000121118.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA20-SX     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1236178..1247464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V57_RS05900 - 1236573..1236686 (+) 114 WP_001789890.1 hypothetical protein -
  Q3V57_RS05905 tsf 1236721..1237602 (+) 882 WP_000201387.1 translation elongation factor Ts -
  Q3V57_RS05910 pyrH 1237739..1238461 (+) 723 WP_000057330.1 UMP kinase -
  Q3V57_RS05915 frr 1238480..1239034 (+) 555 WP_001280006.1 ribosome recycling factor -
  Q3V57_RS05920 - 1239407..1240177 (+) 771 WP_000473699.1 isoprenyl transferase -
  Q3V57_RS05925 - 1240184..1240966 (+) 783 WP_000868412.1 phosphatidate cytidylyltransferase -
  Q3V57_RS05930 eeP 1241178..1242464 (+) 1287 WP_000121118.1 RIP metalloprotease RseP Regulator
  Q3V57_RS05935 - 1242484..1244187 (+) 1704 WP_000814096.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48134.53 Da        Isoelectric Point: 9.5403

>NTDB_id=784032 Q3V57_RS05930 WP_000121118.1 1241178..1242464(+) (eeP) [Staphylococcus aureus strain SA20-SX]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=784032 Q3V57_RS05930 WP_000121118.1 1241178..1242464(+) (eeP) [Staphylococcus aureus strain SA20-SX]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCAC
AACAAGCAGGATTACAAAAAGGTGATAAAATTGTTCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACGAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTTAAACCAATTGTATTCGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(191-265)

Peptidase family M50 (Peptidase_M50)

(9-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395