Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   Q3V62_RS06005 Genome accession   NZ_CP130522
Coordinates   1247694..1248980 (+) Length   428 a.a.
NCBI ID   WP_000121121.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA23-SX     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1242694..1253980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V62_RS05975 - 1243089..1243202 (+) 114 WP_031845108.1 hypothetical protein -
  Q3V62_RS05980 tsf 1243237..1244118 (+) 882 WP_000201386.1 translation elongation factor Ts -
  Q3V62_RS05985 pyrH 1244255..1244977 (+) 723 WP_000057330.1 UMP kinase -
  Q3V62_RS05990 frr 1244996..1245550 (+) 555 WP_001280006.1 ribosome recycling factor -
  Q3V62_RS05995 - 1245923..1246693 (+) 771 WP_000473705.1 isoprenyl transferase -
  Q3V62_RS06000 - 1246700..1247482 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  Q3V62_RS06005 eeP 1247694..1248980 (+) 1287 WP_000121121.1 RIP metalloprotease RseP Regulator
  Q3V62_RS06010 - 1249000..1250703 (+) 1704 WP_000814107.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48150.53 Da        Isoelectric Point: 9.5201

>NTDB_id=783758 Q3V62_RS06005 WP_000121121.1 1247694..1248980(+) (eeP) [Staphylococcus aureus strain SA23-SX]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVYGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=783758 Q3V62_RS06005 WP_000121121.1 1247694..1248980(+) (eeP) [Staphylococcus aureus strain SA23-SX]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATTACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACTTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTCTTCAAACCAATTGTATATGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTCGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCAGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATCGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(191-265)

Peptidase family M50 (Peptidase_M50)

(9-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395