Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   MTP06_RS12470 Genome accession   NZ_AP025692
Coordinates   2880254..2881375 (+) Length   373 a.a.
NCBI ID   WP_010645237.1    Uniprot ID   A0A385DDD7
Organism   Streptomyces sp. PLM4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2875254..2886375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTP06_RS12455 (MTP06_25030) - 2876003..2877757 (-) 1755 WP_186784029.1 sigma factor-like helix-turn-helix DNA-binding protein -
  MTP06_RS12460 (MTP06_25050) - 2878036..2878611 (+) 576 WP_003948874.1 dihydrofolate reductase family protein -
  MTP06_RS12465 (MTP06_25060) radA/sms 2878665..2880083 (+) 1419 WP_003948876.1 DNA repair protein RadA Machinery gene
  MTP06_RS12470 (MTP06_25070) disA 2880254..2881375 (+) 1122 WP_010645237.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  MTP06_RS12475 (MTP06_25080) - 2881457..2882269 (-) 813 WP_240679261.1 hypothetical protein -
  MTP06_RS12480 (MTP06_25090) - 2882625..2883374 (+) 750 WP_008404973.1 phosphatase PAP2 family protein -
  MTP06_RS12485 (MTP06_25100) - 2883487..2884539 (+) 1053 WP_008404974.1 A/G-specific adenine glycosylase -
  MTP06_RS12490 (MTP06_25110) - 2884748..2885287 (+) 540 WP_003948881.1 SigE family RNA polymerase sigma factor -
  MTP06_RS12495 (MTP06_25120) - 2885308..2885976 (+) 669 WP_018895477.1 hypothetical protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40215.10 Da        Isoelectric Point: 5.1034

>NTDB_id=78366 MTP06_RS12470 WP_010645237.1 2880254..2881375(+) (disA) [Streptomyces sp. PLM4]
MAANDRATAPGKSGGPGADGLMRASLSAVAPGTQLRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFSATRLRE
LCKLDGGIVLDKDLTKILRAGVQLVPDPTIPTDETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIAAEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVDEALAELGKLSHTELLELPVVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAI
IDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=78366 MTP06_RS12470 WP_010645237.1 2880254..2881375(+) (disA) [Streptomyces sp. PLM4]
GTGGCAGCCAATGACCGGGCAACGGCCCCCGGCAAGTCCGGCGGGCCCGGTGCCGACGGGCTGATGCGTGCCTCGCTGAG
CGCCGTCGCCCCCGGCACCCAGCTGCGGGACGGGCTGGAGCGGATTCTGCGGGGGAACACCGGCGGACTCATCGTGCTCG
GCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCTCCGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACCTCACCAAGATCCTGCGCGCCGGAGTCCAGCTCGTCCCCGA
CCCGACCATCCCCACCGACGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCAACTTCCCCGTGG
TCTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTCTACGTGGACGGGCAGCGCCGGGTCCTGGAGGACTCGGCCGCCATC
CTCTCCCGCGCCAACCAGGCCCTCGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCCGGCACGCTCTCGGC
GCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCCGTCTCGCAGCGGCTGGAGATGGTCCGCCGGATCGCCG
CCGAGATCGCCGAGTACGTGGTGGAACTGGGCACCGACGGGCGTCTGCTCGCCCTCCAGCTGGACGAGCTGATCGCCGGC
GTCGAGCCCGAACGCGAGCTGGTCGTCCGGGACTACGTGCCGGAACCCACGGCGAAGCGTTCCCGGACGGTGGACGAGGC
GCTGGCGGAGCTGGGCAAGCTCAGCCACACCGAGCTGCTCGAACTGCCCGTGGTGGCGCGGGCGCTCGGCTACACCGGCT
CGCCGGAGGCGCTGGACTCCGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGGCTGCCCGGGGCCATC
ATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCCAGTGTGGACGACCTCCAGACGGTGGACGG
CGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCCGAGTCGTCGATCCTGGAGCGGTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A385DDD7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.761

0.432