Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MTP06_RS07515 Genome accession   NZ_AP025692
Coordinates   1789389..1791122 (-) Length   577 a.a.
NCBI ID   WP_015507928.1    Uniprot ID   A0ABR4SBQ5
Organism   Streptomyces sp. PLM4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1784389..1796122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTP06_RS07500 (MTP06_15100) rpoS 1786077..1787150 (+) 1074 WP_008405566.1 RNA polymerase sigma factor Regulator
  MTP06_RS07505 (MTP06_15110) - 1787167..1787382 (-) 216 WP_003947903.1 hypothetical protein -
  MTP06_RS07510 (MTP06_15120) rcrQ 1787473..1789389 (-) 1917 WP_015507929.1 ABC transporter ATP-binding protein Regulator
  MTP06_RS07515 (MTP06_15130) rcrP 1789389..1791122 (-) 1734 WP_015507928.1 ABC transporter ATP-binding protein Regulator
  MTP06_RS07520 (MTP06_15140) - 1791256..1792710 (-) 1455 WP_248494171.1 FGGY family carbohydrate kinase -
  MTP06_RS07525 (MTP06_15150) - 1792800..1793099 (-) 300 WP_248494173.1 YtxH domain-containing protein -
  MTP06_RS07545 (MTP06_15160) - 1793809..1794261 (-) 453 WP_003947908.1 hypothetical protein -
  MTP06_RS07550 (MTP06_15170) - 1794343..1795227 (-) 885 WP_248494175.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62587.86 Da        Isoelectric Point: 5.6287

>NTDB_id=78358 MTP06_RS07515 WP_015507928.1 1789389..1791122(-) (rcrP) [Streptomyces sp. PLM4]
MLIRLLRTYLRPYQKPIALVMVLQLLQTCAALYLPSLNADIIDRGVVRGDTGVILGLGAVMLAVTLVQMAGNIGAVYFGA
RTAAALGRDVRAAVFDRVQSFSARELNGFGAPSLITRTTNDVQQVQMLALMTFTLMVTAPIMCVGGVIMALGQDVPLSGV
LLAVLPVMAASVGVVVWRLRPLFRSMQKRLDTVNRVLREQITGNRVIRAFVRDRYETERFGRANTDLTEVSLGTGRLLAL
MFPLVMLVVNLSSLAVVWFGAHRIDSGAMEIGSLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTSSSVVP
PAEPVRELAGRGTLEMRAAGFRYPGAEEWVLRDVELFAGPGETTAVIGSTGSGKTTLLGLAARLIDPVEGEVLVDGVDIR
RIDPALLARTVGLVPQKPYLFSGTVASNLRYGNPEASDEELWHALEVAQAKEFVERLEGGLEAPVSQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALRAETAEAGVVIVAQRVSTIRDADRIVVLDEGRVVAVGRHHDLMERD
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=78358 MTP06_RS07515 WP_015507928.1 1789389..1791122(-) (rcrP) [Streptomyces sp. PLM4]
GTGCTCATACGACTCCTGCGGACGTATCTGCGTCCGTACCAGAAACCCATCGCGCTGGTGATGGTGCTCCAACTGCTCCA
GACCTGCGCGGCCCTGTACCTTCCGTCGCTCAACGCGGACATCATCGACCGGGGCGTCGTGCGGGGCGACACGGGCGTCA
TCCTCGGGCTCGGCGCCGTCATGCTGGCGGTCACGCTGGTGCAGATGGCGGGCAACATCGGCGCCGTCTACTTCGGCGCC
CGGACCGCCGCCGCCCTCGGCCGGGACGTGCGGGCGGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCACGGGAGCTGAA
CGGCTTCGGGGCGCCGTCCCTGATCACCCGGACCACCAACGACGTCCAGCAGGTCCAGATGCTGGCCCTGATGACCTTCA
CGCTGATGGTGACGGCGCCCATCATGTGCGTGGGCGGCGTGATCATGGCGCTGGGCCAGGACGTACCGCTCTCCGGGGTG
CTGCTGGCGGTGCTGCCCGTGATGGCGGCCTCGGTCGGCGTGGTCGTCTGGCGGCTGCGGCCGCTCTTCCGCTCCATGCA
GAAGCGGCTGGACACCGTCAACCGGGTGCTGCGGGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTCCGCGACC
GGTACGAGACCGAGCGGTTCGGCCGGGCCAACACCGACCTGACCGAGGTCTCGCTGGGCACCGGCCGGCTGCTGGCGCTG
ATGTTCCCGCTGGTGATGCTGGTGGTGAACCTGTCCTCGCTGGCCGTGGTCTGGTTCGGCGCCCACCGGATCGACAGCGG
CGCGATGGAGATCGGCTCGCTCACCGCCTTCCTCGCCTACCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTGCTGGGGACGAGCAGCAGCGTCGTCCCG
CCCGCCGAGCCGGTCCGCGAACTGGCCGGCCGGGGCACGCTGGAGATGCGGGCCGCGGGGTTCCGCTACCCGGGCGCCGA
GGAGTGGGTCCTGCGCGACGTGGAGCTGTTCGCCGGGCCCGGCGAGACCACCGCCGTCATCGGCTCGACCGGCTCCGGCA
AGACCACCCTGCTCGGCCTCGCCGCCCGGCTGATCGACCCCGTCGAGGGCGAGGTGCTGGTCGACGGCGTCGACATCCGC
CGGATCGACCCGGCGCTGCTGGCCCGCACCGTCGGCCTCGTCCCGCAGAAGCCGTACCTCTTCTCCGGCACCGTGGCGAG
CAACCTGCGGTACGGCAACCCGGAGGCGAGTGACGAGGAGCTGTGGCACGCGCTGGAAGTGGCGCAGGCCAAGGAGTTCG
TCGAGCGGCTGGAAGGCGGGCTGGAGGCTCCCGTCTCGCAGGGCGGGACCAACGTCTCGGGCGGTCAGCGGCAGCGGCTC
GCCATCGCGCGGACCCTGGTGCAGCGCCCCGAGATCTACCTCTTCGACGACTCGTTCTCGGCACTGGACTACGCGACCGA
CGCGGCGCTGCGGGCAGCCCTGCGCGCGGAGACCGCCGAGGCGGGCGTGGTGATCGTCGCCCAGCGGGTGTCGACCATCC
GGGACGCCGACCGGATCGTCGTCCTCGACGAGGGCCGGGTGGTGGCGGTCGGCCGCCACCACGACCTGATGGAACGGGAC
GAGACCTACCGGGAGATTGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.287

99.133

0.38

Multiple sequence alignment