Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MTP06_RS07510 Genome accession   NZ_AP025692
Coordinates   1787473..1789389 (-) Length   638 a.a.
NCBI ID   WP_015507929.1    Uniprot ID   A0ABR4SBP3
Organism   Streptomyces sp. PLM4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1782473..1794389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTP06_RS07490 (MTP06_15080) - 1782592..1783854 (+) 1263 WP_127452405.1 FAD-dependent oxidoreductase -
  MTP06_RS07495 (MTP06_15090) dnaG 1783975..1785879 (+) 1905 WP_248494169.1 DNA primase -
  MTP06_RS07500 (MTP06_15100) rpoS 1786077..1787150 (+) 1074 WP_008405566.1 RNA polymerase sigma factor Regulator
  MTP06_RS07505 (MTP06_15110) - 1787167..1787382 (-) 216 WP_003947903.1 hypothetical protein -
  MTP06_RS07510 (MTP06_15120) rcrQ 1787473..1789389 (-) 1917 WP_015507929.1 ABC transporter ATP-binding protein Regulator
  MTP06_RS07515 (MTP06_15130) rcrP 1789389..1791122 (-) 1734 WP_015507928.1 ABC transporter ATP-binding protein Regulator
  MTP06_RS07520 (MTP06_15140) - 1791256..1792710 (-) 1455 WP_248494171.1 FGGY family carbohydrate kinase -
  MTP06_RS07525 (MTP06_15150) - 1792800..1793099 (-) 300 WP_248494173.1 YtxH domain-containing protein -
  MTP06_RS07545 (MTP06_15160) - 1793809..1794261 (-) 453 WP_003947908.1 hypothetical protein -

Sequence

Protein


Download         Length: 638 a.a.        Molecular weight: 68783.83 Da        Isoelectric Point: 4.8614

>NTDB_id=78357 MTP06_RS07510 WP_015507929.1 1787473..1789389(-) (rcrQ) [Streptomyces sp. PLM4]
MAGPMGAGAPGQQSMDFKGSGKRLLAQFRPEKKVLWAMLATGLVSVALSVTGPKILGWATDLVFAGIVGRDMPAGATREQ
VLAGMREGGDDGVADMLSGMDFTPGQGIDFGAVGEVLLLALGVFLLASALMAVSARLSNRAINRTVFRMRRDVQTKLSRL
PLSYFDQRQRGEVLSRATNDIDNIGQTLQQTMGQVVNSLLTVIGVLVMMFWISPLLALVALVTVPLSFVVATRVGKRSQP
HFVSQWSSTGTLNAHIEEMYTGHSLVKVFGRQDESAERFAEENDALYQASFKAQFTSGIMQPLMMFVSNFNYVLVAVVGG
LRVASGALSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVFELLDADEQEPDPVPGARLEKPLGRVALEKVSF
RYEPDRPLIEDLSLTVEPGRTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVEIAAMAREDLRSRIGMVLQDTWLFG
GTIAENIAYGASREVSREEVEEAARAAHADRFVRTLPDGYDTVLDDEGSGVSAGEKQLVTIARAFLSDPVILVLDEATSS
VDTRTEVLIQQAMARLAHGRTSFVIAHRLSTIRDADTILVMENGAIVEQGSHTELLAAEGAYARLYAAQFAEAAVEVD

Nucleotide


Download         Length: 1917 bp        

>NTDB_id=78357 MTP06_RS07510 WP_015507929.1 1787473..1789389(-) (rcrQ) [Streptomyces sp. PLM4]
ATGGCGGGCCCGATGGGCGCGGGAGCGCCGGGACAGCAGTCGATGGACTTCAAGGGTTCGGGCAAGCGGCTGCTGGCCCA
GTTCCGCCCCGAGAAGAAGGTGCTGTGGGCGATGCTCGCCACCGGCCTGGTCAGCGTGGCGCTCTCGGTGACCGGCCCGA
AGATCCTCGGCTGGGCCACCGACCTGGTCTTCGCGGGCATCGTCGGCCGCGACATGCCGGCCGGCGCCACCCGCGAGCAG
GTGCTGGCGGGGATGCGCGAGGGCGGCGACGACGGCGTGGCCGACATGCTCTCCGGGATGGACTTCACTCCCGGCCAGGG
CATCGACTTCGGTGCCGTCGGCGAGGTGCTGCTGCTGGCCCTCGGCGTCTTCCTGCTGGCCAGCGCCCTGATGGCGGTCT
CGGCCCGGCTGAGCAACCGCGCGATCAACCGCACCGTCTTCCGGATGCGCCGCGACGTGCAGACCAAGCTGTCGCGGCTC
CCGCTCTCCTACTTCGACCAGCGCCAGCGCGGCGAGGTGCTCAGCCGCGCCACCAACGACATCGACAACATCGGCCAGAC
GCTCCAGCAGACGATGGGCCAGGTGGTCAACTCGCTGCTGACCGTCATCGGTGTGCTGGTGATGATGTTCTGGATATCGC
CGCTGCTCGCCCTGGTGGCGCTGGTGACCGTGCCGCTCTCCTTCGTGGTCGCCACCCGGGTCGGCAAGCGCTCCCAGCCG
CACTTCGTCAGCCAGTGGTCCTCCACGGGCACGCTCAACGCCCACATCGAGGAGATGTACACCGGCCACAGCCTGGTCAA
GGTCTTCGGCCGCCAGGACGAGTCGGCCGAGCGGTTCGCCGAGGAGAACGACGCGCTCTACCAGGCGTCCTTCAAGGCCC
AGTTCACCAGCGGCATCATGCAGCCGCTGATGATGTTCGTCTCCAACTTCAACTACGTGCTGGTCGCCGTCGTCGGCGGC
CTCCGGGTCGCCTCGGGCGCCCTGTCCATCGGCGACGTGCAGGCGTTCATCCAGTACTCCCGGCAGTTCTCGATGCCGCT
GACCCAGGTCGCCTCGATGGCCAACCTGGTGCAGTCCGGCGTCGCCTCCGCCGAGCGGGTCTTCGAACTCCTCGACGCCG
ACGAGCAGGAGCCCGACCCGGTCCCCGGCGCCCGCCTGGAGAAGCCGCTGGGCCGCGTCGCCCTGGAGAAGGTCTCCTTC
CGCTACGAGCCGGACCGGCCCCTGATCGAGGACCTCTCCCTGACCGTCGAGCCGGGCCGCACGGTCGCCATCGTCGGCCC
CACCGGCGCCGGCAAGACCACCCTGGTCAACTTGCTGATGCGGTTCTACGAGGTCACGGGCGGCCGGATCACCCTGGACG
GCGTCGAGATCGCCGCCATGGCCCGGGAGGACCTGCGCTCCCGGATCGGCATGGTCCTCCAGGACACCTGGCTGTTCGGC
GGCACCATCGCGGAGAACATCGCCTACGGCGCCTCCCGCGAGGTCAGCCGCGAGGAGGTCGAGGAGGCGGCCCGCGCCGC
CCACGCCGACCGCTTCGTCCGCACGCTCCCCGACGGCTACGACACCGTCCTCGACGACGAGGGCAGCGGGGTCAGCGCCG
GGGAGAAGCAGCTCGTCACCATCGCGCGGGCCTTCCTCTCCGACCCGGTGATCCTCGTCCTGGACGAGGCCACCAGCTCG
GTGGACACCCGTACCGAGGTGCTGATCCAGCAGGCCATGGCCCGGCTCGCGCACGGCCGGACCTCCTTCGTCATCGCCCA
CCGCCTCTCCACGATCCGGGACGCCGACACGATCCTGGTGATGGAGAACGGGGCCATCGTCGAGCAGGGCTCGCACACCG
AACTCCTCGCCGCCGAGGGGGCGTACGCCCGCCTCTACGCGGCCCAGTTCGCCGAGGCGGCCGTCGAGGTCGACTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(111-347)

ABC transporter (ABC_tran)

(410-559)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.613

97.179

0.404

Multiple sequence alignment