Detailed information NTG0078232

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: JLF49_RS07200
• Genome accession: NZ_AP022473
• Coordinates: 1571809..1574022 (+)
• Length: 737 a.a.
• NCBI ID: WP_060498743.1
• Uniprot ID: A0A7X3F0E9
• Organism: Pseudomonas monteilii strain STW0522-72
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1566809..1579022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JLF49_RS07175 (STW0522PSE72_13940)	-	1568123..1568533 (+)	411	WP_200929183.1	hypothetical protein	-
JLF49_RS07180 (STW0522PSE72_13950)	-	1568685..1569308 (+)	624	WP_104835342.1	glutathione S-transferase	-
JLF49_RS07185 (STW0522PSE72_13960)	-	1569442..1570374 (+)	933	WP_016715124.1	ABC transporter ATP-binding protein	-
JLF49_RS07190 (STW0522PSE72_13970)	-	1570371..1571150 (+)	780	WP_060498742.1	ABC transporter permease	-
JLF49_RS07195 (STW0522PSE72_13980)	-	1571160..1571666 (-)	507	Protein_1402	DUF2062 domain-containing protein	-
JLF49_RS07200 (STW0522PSE72_13990)	comA	1571809..1574022 (+)	2214	WP_060498743.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JLF49_RS07205 (STW0522PSE72_14000)	exbB	1574412..1575047 (+)	636	WP_016391244.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
JLF49_RS07210 (STW0522PSE72_14010)	-	1575044..1575478 (+)	435	WP_104835340.1	ExbD/TolR family protein	-
JLF49_RS07215 (STW0522PSE72_14020)	lpxK	1575478..1576479 (+)	1002	WP_060498746.1	tetraacyldisaccharide 4'-kinase	-
JLF49_RS07220 (STW0522PSE72_14030)	-	1576524..1576709 (+)	186	WP_003247142.1	Trm112 family protein	-
JLF49_RS07225 (STW0522PSE72_14040)	kdsB	1576706..1577470 (+)	765	WP_060498747.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
JLF49_RS07230 (STW0522PSE72_14050)	-	1577470..1577934 (+)	465	WP_104835338.1	low molecular weight protein-tyrosine-phosphatase	-
JLF49_RS07235 (STW0522PSE72_14060)	murB	1577931..1578950 (+)	1020	WP_060498749.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 79366.33 Da
• Isoelectric Point: 10.6918

>NTDB_id=78232 JLF49_RS07200 WP_060498743.1 1571809..1574022(+) (comA) [Pseudomonas monteilii strain STW0522-72]
MRTGMFALALGLLCLGFLPALPSVGWLIALAACAVASLFTRVWPLGCFLLGLCWACGSAQLALDDRLAAGLDGRTVWLEG
RVVGLPVRTAQGVRFELDAARSRRAELPQRLQLSWFGGPPLRAGEQWRLAVTLQRPAGLSNPHGPDREAQLLARRVGATG
TVKAGQLLAPVTGGWRDALRQRLLAVEANGRTAALVALVLGDGAGLAREDWQTLQATGTVHLLVISGQHIGLVAGLLYGL
VAGLARWGWWPARLPWLPWACGLAMTAALAYAWLAGGGVPVQRACLMLAVVLLWRLRFRHLGALLPLLLALVVVLLVEPL
AALLPGFWLSFTAVATLLYCFSARLGGWRPWQAWTRAQWVIAIGLLPVLLATGLPVSLSAPLANLVAVPWISLVVLPLAL
LGTVLLPLPVVGEALLWLAGGLLDLLFRGLALVAQQRPAWMPAVLPVWAWLLVCVGALLVLLPRGVPLRGLGGVMLLALW
VPREPVPLGQVEVWQLDVGQGLAVLLRTRHHNLLYDAGPAKGDSDLGERVVLPTLRKLGVAGLDVMLVSHAHADHAGGAA
AIQRGLPVRRTIGGEALNDVPLQPCVSGERWDWDGVRFSLWRWADGQSSNDRSCVLMVEAQGERLLLAGDMEAGAERAWL
AAAETPRVDWLQSPHHGSRSSSSEAFIRATAPRGVLISRGRNNSFGHPHVQVVERYRRYGVTIHDTAVEGALRLVLGRQG
EVEGVRGQRRFWRAQLD

Nucleotide

• Length: 2214 bp

>NTDB_id=78232 JLF49_RS07200 WP_060498743.1 1571809..1574022(+) (comA) [Pseudomonas monteilii strain STW0522-72]
ATGCGCACAGGGATGTTTGCGCTCGCGCTCGGGCTGTTGTGCCTGGGCTTTCTCCCCGCATTGCCATCGGTCGGATGGTT
GATCGCGCTGGCGGCCTGCGCTGTCGCCAGTCTGTTCACCCGCGTGTGGCCGTTGGGCTGCTTTCTGCTGGGCCTGTGCT
GGGCTTGCGGGTCTGCTCAGCTGGCCCTTGATGATCGCCTGGCTGCCGGCCTGGATGGCCGCACCGTGTGGCTGGAAGGG
CGGGTGGTTGGCTTGCCGGTCCGAACGGCACAAGGCGTGCGTTTCGAGCTGGACGCGGCACGCTCGCGGCGGGCCGAACT
GCCGCAGCGCCTGCAACTGAGCTGGTTCGGTGGGCCGCCCCTGCGGGCGGGCGAGCAGTGGCGGCTGGCCGTGACCCTGC
AGCGCCCGGCCGGGCTGTCGAACCCGCATGGGCCAGACCGCGAGGCGCAACTGCTGGCACGGCGGGTGGGTGCCACGGGC
ACAGTCAAGGCGGGGCAGCTGCTGGCGCCAGTAACCGGTGGTTGGCGCGATGCGCTGCGTCAGCGCTTGCTCGCAGTCGA
GGCCAATGGCCGAACGGCGGCGTTGGTGGCGCTGGTGCTAGGTGATGGGGCGGGCCTGGCCCGGGAGGACTGGCAGACGT
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATTTCTGGCCAGCACATCGGCTTGGTCGCCGGTTTGCTGTATGGCCTG
GTTGCCGGGCTGGCACGTTGGGGTTGGTGGCCTGCACGGCTGCCCTGGTTGCCCTGGGCGTGTGGCTTGGCCATGACCGC
AGCACTGGCCTACGCTTGGCTGGCCGGTGGGGGCGTGCCGGTGCAGCGTGCCTGCCTGATGCTGGCCGTGGTGCTGCTCT
GGCGTCTGCGTTTTCGTCACCTCGGTGCATTGTTGCCGCTGTTGTTGGCGCTGGTCGTGGTGTTGCTAGTCGAACCGCTG
GCGGCATTGTTGCCGGGGTTCTGGCTGTCGTTTACCGCAGTCGCCACGCTTCTCTATTGCTTCAGTGCCCGGCTAGGGGG
CTGGCGGCCCTGGCAAGCCTGGACGCGGGCGCAATGGGTAATCGCTATCGGTTTGCTGCCAGTGTTGTTGGCCACTGGCC
TGCCGGTGAGCTTGAGTGCGCCGTTGGCCAATCTGGTAGCGGTGCCGTGGATCAGCCTGGTGGTGTTGCCGTTGGCGCTG
CTGGGCACGGTGCTGCTGCCATTGCCCGTGGTAGGGGAGGCGTTGTTATGGCTGGCGGGCGGGCTGCTGGACCTGTTGTT
CCGAGGGTTGGCGTTGGTGGCGCAACAGCGCCCGGCGTGGATGCCGGCGGTATTGCCAGTGTGGGCCTGGTTACTGGTTT
GCGTGGGGGCGCTGTTGGTGCTGCTGCCTCGGGGCGTGCCGTTGCGTGGGTTGGGGGGCGTGATGCTGTTGGCCCTGTGG
GTGCCGAGGGAGCCGGTGCCGCTTGGGCAGGTCGAAGTCTGGCAACTGGACGTCGGTCAAGGGCTGGCAGTGCTGTTGCG
CACGCGCCACCACAACCTGCTTTACGATGCCGGTCCGGCCAAGGGTGACAGTGACCTGGGCGAGCGGGTGGTGCTGCCGA
CCCTGCGCAAGCTGGGGGTGGCGGGCCTTGACGTGATGCTGGTCAGCCACGCCCATGCTGATCATGCGGGCGGCGCTGCC
GCCATCCAGCGAGGTCTGCCGGTGCGGCGGACAATCGGTGGGGAAGCGCTGAACGATGTTCCGTTGCAACCTTGTGTCAG
CGGCGAGCGATGGGACTGGGATGGCGTGCGATTTTCGCTATGGCGTTGGGCCGACGGACAGAGCAGCAATGACCGCTCGT
GCGTGCTGATGGTCGAGGCGCAGGGCGAGCGCTTGCTGCTGGCAGGGGATATGGAGGCCGGTGCCGAACGGGCCTGGCTG
GCGGCAGCCGAGACGCCGAGGGTCGACTGGTTGCAGTCGCCACACCATGGCAGCCGCAGCTCGTCCAGCGAGGCCTTCAT
CCGTGCCACGGCGCCGCGCGGGGTGCTGATTTCGCGGGGGCGCAACAATAGCTTCGGGCACCCGCATGTACAGGTGGTCG
AGCGCTATCGGCGGTATGGGGTGACGATACATGATACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGCGGCAGGGG
GAGGTTGAAGGTGTTCGGGGGCAGCGGCGGTTTTGGCGGGCTCAACTGGACTAG

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-674)

• Competence protein (Competence) (198-463)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

3D structure

• AlphaFold DB: A0A7X3F0E9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.028	97.693	0.577
comA	Ralstonia pseudosolanacearum GMI1000	36.154	100	0.383