Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   Q3B96_RS13310 Genome accession   NZ_CP130465
Coordinates   2595765..2596646 (-) Length   293 a.a.
NCBI ID   WP_021837675.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MGMM9     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2590765..2601646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3B96_RS13275 (Q3B96_13275) - 2590974..2591450 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  Q3B96_RS13280 (Q3B96_13280) - 2591450..2591734 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  Q3B96_RS13285 (Q3B96_13285) mnhG 2591718..2592092 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  Q3B96_RS13290 (Q3B96_13290) - 2592132..2592521 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  Q3B96_RS13295 (Q3B96_13295) comA 2592538..2593176 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  Q3B96_RS13300 (Q3B96_13300) comP 2593263..2595569 (-) 2307 WP_003184851.1 ATP-binding protein Regulator
  Q3B96_RS13305 (Q3B96_13305) comX 2595592..2595756 (-) 165 WP_003184853.1 competence pheromone ComX -
  Q3B96_RS13310 (Q3B96_13310) comQ 2595765..2596646 (-) 882 WP_021837675.1 polyprenyl synthetase family protein Regulator
  Q3B96_RS13315 (Q3B96_13315) degQ 2596835..2596975 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  Q3B96_RS13320 (Q3B96_13320) - 2597461..2597808 (+) 348 WP_231105863.1 SDR family oxidoreductase -
  Q3B96_RS13325 (Q3B96_13325) - 2597851..2599071 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  Q3B96_RS13330 (Q3B96_13330) - 2599250..2600659 (-) 1410 WP_228767691.1 nicotinate phosphoribosyltransferase -
  Q3B96_RS13335 (Q3B96_13335) - 2600737..2601288 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33390.10 Da        Isoelectric Point: 4.6179

>NTDB_id=782162 Q3B96_RS13310 WP_021837675.1 2595765..2596646(-) (comQ) [Bacillus licheniformis strain MGMM9]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINSSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=782162 Q3B96_RS13310 WP_021837675.1 2595765..2596646(-) (comQ) [Bacillus licheniformis strain MGMM9]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACAGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains


Predicted by InterProScan.

(41-230)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.291

98.635

0.437