Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | Q2B68_RS07050 | Genome accession | NZ_CP130280 |
| Coordinates | 1373782..1375878 (-) | Length | 698 a.a. |
| NCBI ID | WP_063174780.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain PM415 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1368782..1380878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q2B68_RS07025 (Q2B68_07025) | - | 1369371..1369631 (+) | 261 | WP_003154690.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| Q2B68_RS07030 (Q2B68_07030) | - | 1369842..1371359 (-) | 1518 | WP_046559543.1 | ATP-binding protein | - |
| Q2B68_RS07035 (Q2B68_07035) | - | 1371558..1372004 (+) | 447 | WP_003154686.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| Q2B68_RS07040 (Q2B68_07040) | motB | 1372040..1372825 (-) | 786 | WP_003154685.1 | flagellar motor protein MotB | - |
| Q2B68_RS07045 (Q2B68_07045) | motA | 1372797..1373612 (-) | 816 | WP_003154684.1 | flagellar motor stator protein MotA | - |
| Q2B68_RS07050 (Q2B68_07050) | clpE | 1373782..1375878 (-) | 2097 | WP_063174780.1 | ATP-dependent protease ATP-binding subunit ClpE | Regulator |
| Q2B68_RS07055 (Q2B68_07055) | - | 1376280..1377317 (+) | 1038 | WP_003154681.1 | membrane protein | - |
| Q2B68_RS07060 (Q2B68_07060) | - | 1377415..1378536 (+) | 1122 | WP_024085228.1 | hypothetical protein | - |
| Q2B68_RS07065 (Q2B68_07065) | queC | 1378786..1379445 (+) | 660 | WP_003154679.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| Q2B68_RS07070 (Q2B68_07070) | queD | 1379446..1379886 (+) | 441 | WP_003154678.1 | 6-carboxytetrahydropterin synthase QueD | - |
| Q2B68_RS07075 (Q2B68_07075) | queE | 1379879..1380610 (+) | 732 | WP_014304903.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 77743.71 Da Isoelectric Point: 5.1782
>NTDB_id=781748 Q2B68_RS07050 WP_063174780.1 1373782..1375878(-) (clpE) [Bacillus amyloliquefaciens strain PM415]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDNEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLNAIDAEKTKALQEENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVMEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDGIKVRAQ
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDNEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLNAIDAEKTKALQEENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVMEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDGIKVRAQ
Nucleotide
Download Length: 2097 bp
>NTDB_id=781748 Q2B68_RS07050 WP_063174780.1 1373782..1375878(-) (clpE) [Bacillus amyloliquefaciens strain PM415]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATAATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAGTTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAATGTCATCTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAACTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAATGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCTTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGCGCGG
AGCATATTCAAGCCATCATTGAACAAAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGTGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCAGTCAGACGAAG
CCGCGCCGGTTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATTATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTCACCGATGAT
GCGAAGGAAAAAATCGCTGAAATCGGCTACCACCCCGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATGACAACGAAATCAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATAATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAGTTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAATGTCATCTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAACTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAATGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCTTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGCGCGG
AGCATATTCAAGCCATCATTGAACAAAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGTGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCAGTCAGACGAAG
CCGCGCCGGTTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATTATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTCACCGATGAT
GCGAAGGAAAAAATCGCTGAAATCGGCTACCACCCCGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATGACAACGAAATCAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
56.871 |
100 |
0.599 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.676 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae Rx1 |
56.131 |
100 |
0.59 |
| clpE | Streptococcus pneumoniae R6 |
56.131 |
100 |
0.59 |
| clpE | Streptococcus pneumoniae D39 |
56.131 |
100 |
0.59 |
| clpE | Streptococcus pneumoniae TIGR4 |
56.131 |
100 |
0.59 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.389 |
91.404 |
0.497 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.677 |
90.544 |
0.423 |
| clpC | Streptococcus thermophilus LMD-9 |
44 |
93.123 |
0.41 |
| clpC | Streptococcus pneumoniae Rx1 |
46.104 |
88.252 |
0.407 |
| clpC | Streptococcus pneumoniae D39 |
46.104 |
88.252 |
0.407 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.104 |
88.252 |
0.407 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.538 |
93.123 |
0.405 |
| clpC | Streptococcus mutans UA159 |
44.553 |
88.109 |
0.393 |
| clpA | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
41.914 |
86.819 |
0.364 |