Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PO880_RS04775 Genome accession   NZ_CP116962
Coordinates   1016107..1017375 (+) Length   422 a.a.
NCBI ID   WP_002362168.1    Uniprot ID   -
Organism   Enterococcus faecalis strain DM86     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1011107..1022375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO880_RS04750 (PO880_04750) - 1012120..1012713 (+) 594 WP_002362865.1 response regulator -
  PO880_RS04755 (PO880_04755) - 1012764..1013335 (-) 572 Protein_934 CHAP domain-containing protein -
  PO880_RS15480 (PO880_04760) - 1013286..1013618 (-) 333 WP_002362869.1 ATP-binding protein -
  PO880_RS04765 (PO880_04765) - 1014224..1014826 (-) 603 WP_202496847.1 YczE/YyaS/YitT family protein -
  PO880_RS04770 (PO880_04770) - 1014912..1015691 (-) 780 WP_010710611.1 SDR family oxidoreductase -
  PO880_RS04775 (PO880_04775) eeP 1016107..1017375 (+) 1269 WP_002362168.1 RIP metalloprotease RseP Regulator
  PO880_RS04780 (PO880_04780) - 1017447..1019165 (+) 1719 WP_002359769.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46486.46 Da        Isoelectric Point: 6.6651

>NTDB_id=781740 PO880_RS04775 WP_002362168.1 1016107..1017375(+) (eeP) [Enterococcus faecalis strain DM86]
MKTIITFIIVFGILVLVHEFGHFYFAKRAGILVREFAIGMGPKIFAHRGKDGTTYTIRLLPIGGYVRMAGMGEDMTEITP
GMPLSVELNAVGNVVKINTSKKVQLPHSIPMEVVDFDLEKELFIKGYVNGNEEEETVYKVDHDATIIESDGTEVRIAPLD
VQFQSAKLSQRILTNFAGPMNNFILGFILFTLAVFLQGGVTDLNTNQIGQVIPNGPAAEAGLKENDKVLSINNQKIKKYE
DFTTIVQKNPEKPLTFVVERNGKEEQLTVTPEKQKVEKQTIGKVGVYPYMKTDLPSKLMGGIQDTLNSTTQIFKALGSLF
TGFSLNKLGGPVMMFKLSEEASNAGVSTVVFLMAMLSMNLGIINLLPIPALDGGKIVLNIIEGVRGKPISPEKEGIITLI
GFGFVMVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=781740 PO880_RS04775 WP_002362168.1 1016107..1017375(+) (eeP) [Enterococcus faecalis strain DM86]
ATGAAAACAATTATCACATTCATTATTGTCTTCGGTATTCTTGTCCTCGTACATGAATTTGGCCACTTTTATTTTGCAAA
ACGAGCGGGTATTTTAGTTCGTGAGTTTGCAATCGGAATGGGACCAAAGATTTTTGCGCATCGTGGAAAAGATGGCACCA
CTTATACGATTCGCTTATTGCCAATTGGTGGCTATGTGCGAATGGCTGGGATGGGCGAAGACATGACAGAAATCACACCA
GGTATGCCTCTATCTGTTGAGTTAAATGCCGTGGGTAATGTGGTTAAAATTAATACAAGTAAAAAAGTACAATTACCTCA
TAGTATTCCGATGGAAGTCGTTGATTTTGATCTTGAAAAAGAATTATTCATCAAGGGCTATGTCAATGGAAACGAGGAAG
AAGAAACCGTTTATAAAGTTGACCATGATGCAACGATTATTGAAAGTGATGGAACCGAGGTGCGGATTGCGCCACTTGAC
GTTCAATTTCAATCAGCGAAATTATCGCAACGCATTTTGACGAACTTTGCGGGACCCATGAATAACTTTATCTTAGGGTT
TATTCTGTTTACGTTAGCGGTCTTTCTACAAGGAGGCGTTACTGATTTAAACACGAATCAAATTGGACAAGTGATTCCTA
ATGGCCCAGCCGCAGAAGCTGGGTTGAAAGAAAATGATAAAGTCTTATCGATTAATAATCAAAAAATCAAAAAATACGAA
GATTTTACAACCATTGTGCAGAAGAACCCCGAAAAGCCGTTAACGTTCGTAGTTGAGCGTAACGGCAAAGAAGAGCAACT
AACAGTGACACCAGAAAAACAAAAAGTGGAAAAACAAACGATTGGTAAAGTCGGCGTTTATCCTTATATGAAAACCGATT
TACCGTCAAAATTGATGGGCGGTATTCAGGATACTTTAAATAGTACGACACAGATTTTTAAAGCACTCGGCTCACTATTC
ACAGGCTTTAGTTTAAACAAACTAGGTGGGCCAGTCATGATGTTTAAGTTATCGGAAGAAGCATCCAATGCTGGAGTAAG
TACAGTTGTATTCTTAATGGCCATGTTGTCAATGAACTTAGGGATTATTAATTTGTTGCCGATCCCAGCTTTAGATGGCG
GGAAAATTGTCTTAAACATTATTGAAGGTGTACGTGGAAAACCAATTAGTCCTGAAAAAGAAGGCATCATTACGTTAATT
GGCTTTGGGTTTGTCATGGTGTTAATGGTGTTAGTTACTTGGAACGATATTCAACGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-260)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.738

100

0.545
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545