Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   QZH48_RS02030 Genome accession   NZ_CP129879
Coordinates   406741..407523 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis subsp. lactis strain CAB701     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 401741..412523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZH48_RS02005 (QZH48_02005) vicX 401764..402576 (-) 813 WP_038599190.1 MBL fold metallo-hydrolase Regulator
  QZH48_RS02010 (QZH48_02010) vicK 402747..404189 (-) 1443 WP_058206000.1 cell wall metabolism sensor histidine kinase WalK Regulator
  QZH48_RS02015 (QZH48_02015) yycF 404182..404883 (-) 702 WP_038599193.1 response regulator YycF -
  QZH48_RS02020 (QZH48_02020) tmk 405061..405696 (+) 636 WP_038599196.1 dTMP kinase -
  QZH48_RS02025 (QZH48_02025) - 405829..406689 (+) 861 WP_038599199.1 DNA polymerase III subunit delta' -
  QZH48_RS02030 (QZH48_02030) yaaT 406741..407523 (+) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  QZH48_RS02035 (QZH48_02035) yabA 407516..407842 (+) 327 WP_278227149.1 DNA replication initiation control protein YabA -
  QZH48_RS02040 (QZH48_02040) rsmI 407842..408717 (+) 876 WP_058204088.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QZH48_RS02045 (QZH48_02045) - 408794..408985 (-) 192 WP_003131566.1 hypothetical protein -
  QZH48_RS02050 (QZH48_02050) mvk 409048..409980 (-) 933 WP_038599208.1 mevalonate kinase -
  QZH48_RS02055 (QZH48_02055) mvaD 410285..411241 (+) 957 WP_301675777.1 diphosphomevalonate decarboxylase -
  QZH48_RS02060 (QZH48_02060) - 411228..412217 (+) 990 WP_098393174.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=781173 QZH48_RS02030 WP_010905316.1 406741..407523(+) (yaaT) [Lactococcus lactis subsp. lactis strain CAB701]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=781173 QZH48_RS02030 WP_010905316.1 406741..407523(+) (yaaT) [Lactococcus lactis subsp. lactis strain CAB701]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388