Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PIB32_RS14180 Genome accession   NZ_CP116898
Coordinates   3400316..3400711 (-) Length   131 a.a.
NCBI ID   WP_067084389.1    Uniprot ID   A0A143HI02
Organism   Microbulbifer sp. RZ01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3395316..3405711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PIB32_RS14165 - 3396861..3399002 (-) 2142 WP_308364229.1 methyl-accepting chemotaxis protein -
  PIB32_RS14170 - 3399136..3399678 (-) 543 WP_308364230.1 chemotaxis protein CheW -
  PIB32_RS14175 pilH 3399695..3400057 (-) 363 WP_183459011.1 twitching motility response regulator PilH -
  PIB32_RS14180 pilG 3400316..3400711 (-) 396 WP_067084389.1 twitching motility response regulator PilG Regulator
  PIB32_RS14185 gshB 3400984..3401940 (+) 957 WP_308364232.1 glutathione synthase -
  PIB32_RS14190 - 3402058..3402966 (+) 909 WP_308364233.1 TonB family protein -
  PIB32_RS14195 - 3402992..3403576 (+) 585 WP_308364234.1 YqgE/AlgH family protein -
  PIB32_RS14200 ruvX 3403576..3404016 (+) 441 WP_308364235.1 Holliday junction resolvase RuvX -
  PIB32_RS14205 hemC 3404086..3405003 (+) 918 WP_308364236.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14346.57 Da        Isoelectric Point: 7.2147

>NTDB_id=780969 PIB32_RS14180 WP_067084389.1 3400316..3400711(-) (pilG) [Microbulbifer sp. RZ01]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=780969 PIB32_RS14180 WP_067084389.1 3400316..3400711(-) (pilG) [Microbulbifer sp. RZ01]
ATGGAGCTCAACTGGGAAAGCCTGACGGTGATGGTGATCGACGACAGTAAGACGATTCGCCGCACCGCCGAGACGCTGCT
GCAAAAAGCGGGGTGTACGGTGGTTACCGCGACGGACGGTTTTGATGCCTTGGCAAAAATCGCCGATTCGCGGCCGGATA
TTATCTTTGTCGATATCATGATGCCGCGCCTGGATGGCTATCAAACCTGCGCGCTGATCAAAAACAACAGCGAATTCCGC
TCGACGCCGGTGGTGATGTTGTCGAGCAAGGACGGTTTGTTTGACAAGGCCAAGGGTCGGGTGGTCGGTTGTGATCAATA
TCTGACCAAGCCGTTCAGCAAGAGCGAGCTGTTGGGTGCGATCTCGGCTCACGCCAAGCCGCATCACGCGGCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A143HI02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

94.656

0.702
  vicR Streptococcus mutans UA159

41.026

89.313

0.366