Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PPM45_RS06240 Genome accession   NZ_CP116870
Coordinates   1208560..1209216 (+) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis subsp. subtilis strain Master_strain     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203560..1214216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM45_RS06210 oppF 1204025..1204942 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  PPM45_RS06215 yjbB 1205049..1206266 (+) 1218 WP_010886478.1 MFS transporter -
  PPM45_RS06220 yjbC 1206430..1207008 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  PPM45_RS06225 spx 1207189..1207584 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  PPM45_RS06230 yjbE 1207627..1208283 (-) 657 WP_003232944.1 TerC family protein -
  PPM45_RS06235 - 1208453..1208593 (+) 141 WP_119122854.1 hypothetical protein -
  PPM45_RS06240 mecA 1208560..1209216 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  PPM45_RS06245 - 1209211..1209333 (-) 123 WP_003245684.1 hypothetical protein -
  PPM45_RS06250 coiA 1209407..1210528 (+) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  PPM45_RS06255 pepF 1210758..1212587 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  PPM45_RS06260 - 1212625..1212792 (-) 168 WP_003244944.1 hypothetical protein -
  PPM45_RS06265 spxH 1213106..1214005 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=780700 PPM45_RS06240 WP_003245194.1 1208560..1209216(+) (mecA) [Bacillus subtilis subsp. subtilis strain Master_strain]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=780700 PPM45_RS06240 WP_003245194.1 1208560..1209216(+) (mecA) [Bacillus subtilis subsp. subtilis strain Master_strain]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1