Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   PPM66_RS14745 Genome accession   NZ_CP116867
Coordinates   2805102..2806001 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis subsp. subtilis strain MGP008     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2800102..2811001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM66_RS14710 mrpE 2800342..2800818 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  PPM66_RS14715 mrpF 2800818..2801102 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  PPM66_RS14720 mnhG 2801086..2801460 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  PPM66_RS14725 yuxO 2801499..2801879 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  PPM66_RS14730 comA 2801898..2802542 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  PPM66_RS14735 comP 2802623..2804932 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  PPM66_RS14740 comX 2804947..2805114 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  PPM66_RS14745 comQ 2805102..2806001 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  PPM66_RS14750 degQ 2806186..2806326 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  PPM66_RS14755 - 2806548..2806673 (+) 126 WP_003228793.1 hypothetical protein -
  PPM66_RS14760 - 2806787..2807155 (+) 369 WP_003243784.1 hypothetical protein -
  PPM66_RS14765 pdeH 2807131..2808360 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  PPM66_RS14770 pncB 2808497..2809969 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  PPM66_RS14775 pncA 2809985..2810536 (-) 552 WP_003243099.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=780487 PPM66_RS14745 WP_003243039.1 2805102..2806001(-) (comQ) [Bacillus subtilis subsp. subtilis strain MGP008]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=780487 PPM66_RS14745 WP_003243039.1 2805102..2806001(-) (comQ) [Bacillus subtilis subsp. subtilis strain MGP008]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1