Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | PNF30_RS18710 | Genome accession | NZ_CP116774 |
| Coordinates | 3662035..3664470 (-) | Length | 811 a.a. |
| NCBI ID | WP_048240170.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain SRCM125915 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3657035..3669470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PNF30_RS18685 (PNF30_18685) | ispF | 3657044..3657520 (-) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| PNF30_RS18690 (PNF30_18690) | ispD | 3657524..3658213 (-) | 690 | WP_024425583.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| PNF30_RS18695 (PNF30_18695) | - | 3658227..3659327 (-) | 1101 | WP_095407564.1 | PIN/TRAM domain-containing protein | - |
| PNF30_RS18700 (PNF30_18700) | disA | 3659480..3660559 (-) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| PNF30_RS18705 (PNF30_18705) | radA | 3660562..3661941 (-) | 1380 | WP_025092231.1 | DNA repair protein RadA | Machinery gene |
| PNF30_RS18710 (PNF30_18710) | clpC | 3662035..3664470 (-) | 2436 | WP_048240170.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| PNF30_RS18715 (PNF30_18715) | - | 3664467..3665558 (-) | 1092 | WP_058838237.1 | protein arginine kinase | - |
| PNF30_RS18720 (PNF30_18720) | - | 3665563..3666120 (-) | 558 | WP_205183538.1 | UvrB/UvrC motif-containing protein | - |
| PNF30_RS18725 (PNF30_18725) | - | 3666135..3666599 (-) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 89995.73 Da Isoelectric Point: 6.2469
>NTDB_id=780207 PNF30_RS18710 WP_048240170.1 3662035..3664470(-) (clpC) [Bacillus safensis strain SRCM125915]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=780207 PNF30_RS18710 WP_048240170.1 3662035..3664470(-) (clpC) [Bacillus safensis strain SRCM125915]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGTTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGCCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCCGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATCGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTTCTAAGTAGAAGAACAAAAAATAACCCTGTACTGATCGGTGAGCCTGGTGTTG
GTAAAACAGCTATTGCAGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTACCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTAGATATGGGAACAGTTGTAGCTGGTACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACGCTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCATCTAATATCTTAAAGCCATCCTTAGCACGTGGAGAGCTTCAATGTATCGGAGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTCGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGGTATGAAGCACATCACCGTGTGTCCATTACAGATGAAGCAATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCAATGGTC
GTTTCCAGCTGGACGGGAGTTCCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTCGCTGTAGCGAAAGCTGTGAGACGTGCACGTGCTGGCCTGAAAG
ATCCGAAGCGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTCGGTAAAACAGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTCGGATCACCTCCAGGCTATGTCGGCTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGACGTACCGTTGACTTCAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGC
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGATCTTGAGTACGGTGCGCGCCCGTTAAGAAGAGCGATTCAAAAGCACG
TGGAAGATCGACTTTCTGAAGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGTTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGCCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCCGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATCGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTTCTAAGTAGAAGAACAAAAAATAACCCTGTACTGATCGGTGAGCCTGGTGTTG
GTAAAACAGCTATTGCAGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTACCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTAGATATGGGAACAGTTGTAGCTGGTACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACGCTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCATCTAATATCTTAAAGCCATCCTTAGCACGTGGAGAGCTTCAATGTATCGGAGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTCGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGGTATGAAGCACATCACCGTGTGTCCATTACAGATGAAGCAATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCAATGGTC
GTTTCCAGCTGGACGGGAGTTCCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTCGCTGTAGCGAAAGCTGTGAGACGTGCACGTGCTGGCCTGAAAG
ATCCGAAGCGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTCGGTAAAACAGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTCGGATCACCTCCAGGCTATGTCGGCTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGACGTACCGTTGACTTCAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGC
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGATCTTGAGTACGGTGCGCGCCCGTTAAGAAGAGCGATTCAAAAGCACG
TGGAAGATCGACTTTCTGAAGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.556 |
100 |
0.45 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.229 |
87.916 |
0.433 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
52.868 |
79.531 |
0.42 |