Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PNF30_RS15085 Genome accession   NZ_CP116774
Coordinates   2919354..2920145 (-) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain SRCM125915     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2914354..2925145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF30_RS15060 (PNF30_15060) - 2916918..2917901 (-) 984 WP_024425218.1 glycosyltransferase family 2 protein -
  PNF30_RS15065 (PNF30_15065) - 2918201..2918473 (-) 273 WP_024425219.1 YfhJ family protein -
  PNF30_RS15070 (PNF30_15070) - 2918590..2918739 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  PNF30_RS15075 (PNF30_15075) - 2918765..2918938 (+) 174 WP_008360604.1 YpzG family protein -
  PNF30_RS15080 (PNF30_15080) - 2919036..2919350 (-) 315 WP_272510357.1 YfhH family protein -
  PNF30_RS15085 (PNF30_15085) recX 2919354..2920145 (-) 792 WP_024425808.1 recombination regulator RecX Regulator
  PNF30_RS15090 (PNF30_15090) - 2920240..2921136 (+) 897 WP_034623246.1 TIGR01777 family oxidoreductase -
  PNF30_RS15095 (PNF30_15095) - 2921189..2921299 (+) 111 WP_017358836.1 YfhE family protein -
  PNF30_RS15100 (PNF30_15100) - 2921361..2921516 (+) 156 WP_024425223.1 YfhD family protein -
  PNF30_RS15105 (PNF30_15105) - 2921555..2922142 (-) 588 WP_272510358.1 nitroreductase family protein -
  PNF30_RS15110 (PNF30_15110) - 2922416..2923672 (+) 1257 WP_024425225.1 transcriptional regulator -
  PNF30_RS15115 (PNF30_15115) - 2923710..2924177 (-) 468 WP_024425226.1 thiol-disulfide oxidoreductase DCC family protein -
  PNF30_RS15120 (PNF30_15120) - 2924511..2925059 (-) 549 WP_144472406.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=780203 PNF30_RS15085 WP_024425808.1 2919354..2920145(-) (recX) [Bacillus safensis strain SRCM125915]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=780203 PNF30_RS15085 WP_024425808.1 2919354..2920145(-) (recX) [Bacillus safensis strain SRCM125915]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGTAAAGGACCGTCCGTCTTAAAAAAAG
AATTGAAGCTCAAAGGCATAGACGATGACACGATTGAACAGGCACTATCGCAATACCCTGATGACTTACAGCTCGAGGAA
GCTGTAAAGCAGGTGCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAAAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639