Detailed information NTG0780196

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: PNF30_RS13700
• Genome accession: NZ_CP116774
• Coordinates: 2653281..2654243 (-)
• Length: 320 a.a.
• NCBI ID: WP_144470145.1
• Uniprot ID: -
• Organism: Bacillus safensis strain SRCM125915
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2648281..2659243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF30_RS13670 (PNF30_13670)	-	2648443..2649423 (-)	981	WP_095408192.1	ABC transporter ATP-binding protein	-
PNF30_RS13675 (PNF30_13675)	-	2649573..2650376 (-)	804	WP_095408191.1	DUF2268 domain-containing protein	-
PNF30_RS13680 (PNF30_13680)	fabF	2650454..2651695 (-)	1242	WP_041089814.1	beta-ketoacyl-ACP synthase II	-
PNF30_RS13685 (PNF30_13685)	-	2651717..2652655 (-)	939	WP_095408190.1	beta-ketoacyl-ACP synthase III	-
PNF30_RS13690 (PNF30_13690)	-	2652827..2653060 (+)	234	WP_144470147.1	hypothetical protein	-
PNF30_RS13695 (PNF30_13695)	comZ	2653071..2653268 (-)	198	WP_024425054.1	ComZ family protein	Regulator
PNF30_RS13700 (PNF30_13700)	med	2653281..2654243 (-)	963	WP_144470145.1	BMP family ABC transporter substrate-binding protein	Regulator
PNF30_RS13705 (PNF30_13705)	-	2654335..2654910 (-)	576	WP_095408187.1	nad binding enzyme	-
PNF30_RS13710 (PNF30_13710)	-	2654984..2655724 (-)	741	WP_205185342.1	hypothetical protein	-
PNF30_RS13715 (PNF30_13715)	-	2655937..2656131 (+)	195	WP_003211779.1	YjzD family protein	-
PNF30_RS13720 (PNF30_13720)	-	2656246..2657511 (-)	1266	WP_095408675.1	MFS transporter	-
PNF30_RS13725 (PNF30_13725)	-	2657685..2657864 (-)	180	WP_008348517.1	YjzC family protein	-
PNF30_RS13730 (PNF30_13730)	argF	2657967..2658917 (-)	951	WP_272510294.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35595.47 Da
• Isoelectric Point: 5.1136

>NTDB_id=780196 PNF30_RS13700 WP_144470145.1 2653281..2654243(-) (med) [Bacillus safensis strain SRCM125915]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=780196 PNF30_RS13700 WP_144470145.1 2653281..2654243(-) (med) [Bacillus safensis strain SRCM125915]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCTCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTCAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCAGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGGGCAAAATATCAAGATGAACATGTACAAGTGTTAGCGGAGTTTGTTGA
AAACTGGGATGATGCTGATAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTATGTCACCGATCAATCC
AACCTCGGCAGCCATACGGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGGTGAGTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCTCCA
CCATTGACGACGCTTTTGTGAAAGATATTGAAAGTGATATTGCATCTTACAAAAAAACAGGCAAACTACCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.217	97.813	0.628