Detailed information NTG0780130

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: PNF29_RS15140
• Genome accession: NZ_CP116773
• Coordinates: 2837911..2838864 (-)
• Length: 317 a.a.
• NCBI ID: WP_041340417.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM125727
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2832911..2843864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF29_RS15110 (PNF29_15110)	appD	2833029..2834015 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
PNF29_RS15115 (PNF29_15115)	yjaZ	2834208..2834993 (-)	786	WP_272515600.1	DUF2268 domain-containing protein	-
PNF29_RS15120 (PNF29_15120)	fabF	2835069..2836310 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
PNF29_RS15125 (PNF29_15125)	fabH	2836333..2837271 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
PNF29_RS15130 (PNF29_15130)	yjzB	2837436..2837675 (+)	240	WP_003232972.1	spore coat protein YjzB	-
PNF29_RS15135 (PNF29_15135)	comZ	2837705..2837896 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
PNF29_RS15140 (PNF29_15140)	med	2837911..2838864 (-)	954	WP_041340417.1	transcriptional regulator Med	Regulator
PNF29_RS15145 (PNF29_15145)	-	2838955..2839512 (-)	558	WP_017695676.1	hypothetical protein	-
PNF29_RS15150 (PNF29_15150)	-	2839594..2840328 (-)	735	WP_041340422.1	hypothetical protein	-
PNF29_RS15155 (PNF29_15155)	yjzD	2840577..2840762 (+)	186	WP_003245236.1	YjzD family protein	-
PNF29_RS15160 (PNF29_15160)	yjzC	2840809..2840988 (-)	180	WP_003245356.1	YjzC family protein	-
PNF29_RS15170 (PNF29_15170)	argF	2842364..2843323 (-)	960	WP_095843628.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35282.79 Da
• Isoelectric Point: 4.6031

>NTDB_id=780130 PNF29_RS15140 WP_041340417.1 2837911..2838864(-) (med) [Bacillus subtilis strain SRCM125727]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIVNAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKSNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=780130 PNF29_RS15140 WP_041340417.1 2837911..2838864(-) (med) [Bacillus subtilis strain SRCM125727]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCGTAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGTAGTGAATATGCTGAGGTGTTTAACCTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGTGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAATCGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.054	100	0.991