Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PNF29_RS15135 Genome accession   NZ_CP116773
Coordinates   2837705..2837896 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM125727     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2832705..2842896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF29_RS15110 (PNF29_15110) appD 2833029..2834015 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  PNF29_RS15115 (PNF29_15115) yjaZ 2834208..2834993 (-) 786 WP_272515600.1 DUF2268 domain-containing protein -
  PNF29_RS15120 (PNF29_15120) fabF 2835069..2836310 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  PNF29_RS15125 (PNF29_15125) fabH 2836333..2837271 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  PNF29_RS15130 (PNF29_15130) yjzB 2837436..2837675 (+) 240 WP_003232972.1 spore coat protein YjzB -
  PNF29_RS15135 (PNF29_15135) comZ 2837705..2837896 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  PNF29_RS15140 (PNF29_15140) med 2837911..2838864 (-) 954 WP_041340417.1 transcriptional regulator Med Regulator
  PNF29_RS15145 (PNF29_15145) - 2838955..2839512 (-) 558 WP_017695676.1 hypothetical protein -
  PNF29_RS15150 (PNF29_15150) - 2839594..2840328 (-) 735 WP_041340422.1 hypothetical protein -
  PNF29_RS15155 (PNF29_15155) yjzD 2840577..2840762 (+) 186 WP_003245236.1 YjzD family protein -
  PNF29_RS15160 (PNF29_15160) yjzC 2840809..2840988 (-) 180 WP_003245356.1 YjzC family protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=780129 PNF29_RS15135 WP_003224559.1 2837705..2837896(-) (comZ) [Bacillus subtilis strain SRCM125727]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=780129 PNF29_RS15135 WP_003224559.1 2837705..2837896(-) (comZ) [Bacillus subtilis strain SRCM125727]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1