Detailed information NTG0780101

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: PNF29_RS08505
• Genome accession: NZ_CP116773
• Coordinates: 1617105..1619435 (+)
• Length: 776 a.a.
• NCBI ID: WP_144453705.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM125727
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1612105..1624435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF29_RS08465 (PNF29_08465)	yhbY	1612342..1612632 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
PNF29_RS08470 (PNF29_08470)	nadD	1612644..1613213 (+)	570	WP_041333756.1	nicotinate-nucleotide adenylyltransferase	-
PNF29_RS08475 (PNF29_08475)	yqeK	1613203..1613763 (+)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
PNF29_RS08480 (PNF29_08480)	rsfS	1613781..1614137 (+)	357	WP_014480315.1	ribosome silencing factor	-
PNF29_RS08485 (PNF29_08485)	yqeM	1614134..1614877 (+)	744	WP_029317885.1	class I SAM-dependent DNA methyltransferase	-
PNF29_RS08490 (PNF29_08490)	comER	1614943..1615764 (-)	822	WP_014480313.1	late competence protein ComER	-
PNF29_RS08495 (PNF29_08495)	comEA	1615848..1616465 (+)	618	WP_004398514.1	competence protein ComEA	Machinery gene
PNF29_RS08500 (PNF29_08500)	comEB	1616532..1617101 (+)	570	WP_003229978.1	ComE operon protein 2	-
PNF29_RS08505 (PNF29_08505)	comEC	1617105..1619435 (+)	2331	WP_144453705.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PNF29_RS08510 (PNF29_08510)	yqzM	1619475..1619609 (-)	135	WP_003229983.1	YqzM family protein	-
PNF29_RS08515 (PNF29_08515)	-	1619650..1619799 (+)	150	WP_120363468.1	hypothetical protein	-
PNF29_RS08520 (PNF29_08520)	holA	1619839..1620882 (+)	1044	WP_041333763.1	DNA polymerase III subunit delta	-
PNF29_RS08525 (PNF29_08525)	rpsT	1620897..1621163 (-)	267	WP_003229989.1	30S ribosomal protein S20	-
PNF29_RS08530 (PNF29_08530)	gpr	1621366..1622472 (+)	1107	WP_014480309.1	GPR endopeptidase	-
PNF29_RS08535 (PNF29_08535)	spoIIP	1622535..1623740 (+)	1206	WP_014477383.1	spore autolysin SpoIIP	-
PNF29_RS08540 (PNF29_08540)	yqxA	1623757..1624095 (+)	339	WP_014477382.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86673.13 Da
• Isoelectric Point: 7.0687

>NTDB_id=780101 PNF29_RS08505 WP_144453705.1 1617105..1619435(+) (comEC) [Bacillus subtilis strain SRCM125727]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVETPDKEKWAAAYRVQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFPPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLFFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPG
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=780101 PNF29_RS08505 WP_144453705.1 1617105..1619435(+) (comEC) [Bacillus subtilis strain SRCM125727]
ATGCGTAATTCGCGCTTATTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCGTTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATTCAAAACTGCAGCGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTTTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATTCGCCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCCGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGTTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGAAGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGTTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGATGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGGCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGGA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGACCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	98.067	100	0.981