Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   PND17_RS05195 Genome accession   NZ_CP116772
Coordinates   978956..980218 (-) Length   420 a.a.
NCBI ID   WP_271298300.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain strain TSGB 4141     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 973956..985218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PND17_RS05185 (PND17_05185) - 974467..976407 (-) 1941 WP_271298520.1 ABC transporter substrate binding protein -
  PND17_RS05190 (PND17_05190) - 977023..978885 (-) 1863 WP_271298301.1 proline--tRNA ligase -
  PND17_RS05195 (PND17_05195) eeP 978956..980218 (-) 1263 WP_271298300.1 RIP metalloprotease RseP Regulator
  PND17_RS05200 (PND17_05200) - 980235..981029 (-) 795 WP_232976038.1 phosphatidate cytidylyltransferase -
  PND17_RS05205 (PND17_05205) - 981042..981791 (-) 750 WP_002949314.1 isoprenyl transferase -
  PND17_RS05210 (PND17_05210) - 981920..982258 (-) 339 WP_011225395.1 preprotein translocase subunit YajC -
  PND17_RS05215 (PND17_05215) - 982384..983100 (-) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  PND17_RS05220 (PND17_05220) - 983289..984638 (-) 1350 WP_011680683.1 glucose-6-phosphate isomerase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45635.07 Da        Isoelectric Point: 6.5104

>NTDB_id=780045 PND17_RS05195 WP_271298300.1 978956..980218(-) (eeP) [Streptococcus thermophilus strain strain TSGB 4141]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVTNGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVAPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=780045 PND17_RS05195 WP_271298300.1 978956..980218(-) (eeP) [Streptococcus thermophilus strain strain TSGB 4141]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACAGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGACTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGGAGCTACTTTTTAGGTGTCGCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACTAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(204-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.524

100

0.995

  eeP Streptococcus thermophilus LMG 18311

99.286

100

0.993