Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   PJU73_RS00610 Genome accession   NZ_CP116766
Coordinates   117048..117665 (+) Length   205 a.a.
NCBI ID   WP_237090958.1    Uniprot ID   -
Organism   Neisseria lisongii strain ZJ106     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 112048..122665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJU73_RS00590 (PJU73_00590) metK 112753..113922 (+) 1170 WP_237090954.1 methionine adenosyltransferase -
  PJU73_RS00595 (PJU73_00595) - 114058..114354 (+) 297 WP_237090955.1 accessory factor UbiK family protein -
  PJU73_RS00600 (PJU73_00600) comM 114361..115851 (+) 1491 WP_237090956.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  PJU73_RS00605 (PJU73_00605) - 116003..117016 (+) 1014 WP_237090957.1 SPOR domain-containing protein -
  PJU73_RS00610 (PJU73_00610) dsbA1 117048..117665 (+) 618 WP_237090958.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  PJU73_RS00615 (PJU73_00615) - 117960..118784 (+) 825 WP_237090959.1 undecaprenyl-diphosphate phosphatase -
  PJU73_RS00620 (PJU73_00620) - 118979..119170 (-) 192 WP_237090960.1 zinc-finger domain-containing protein -
  PJU73_RS00625 (PJU73_00625) ilvE 119339..120337 (-) 999 WP_237090961.1 branched-chain-amino-acid transaminase -
  PJU73_RS00630 (PJU73_00630) - 120560..120793 (-) 234 WP_237090962.1 hypothetical protein -
  PJU73_RS00635 (PJU73_00635) - 120792..121115 (+) 324 WP_237090963.1 lipopolysaccharide assembly LapA domain-containing protein -
  PJU73_RS00640 (PJU73_00640) lapB 121118..122287 (+) 1170 WP_237090964.1 lipopolysaccharide assembly protein LapB -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 23114.91 Da        Isoelectric Point: 9.8301

>NTDB_id=779983 PJU73_RS00610 WP_237090958.1 117048..117665(+) (dsbA1) [Neisseria lisongii strain ZJ106]
MKKAAWLVLLPALAQAAVVGEDYTVLAKPIPQLQPNKVEVLEFFGYFCVHCYHLDPILLKHSRSFAPDTYLRTEHVVWQP
DMLGLAKVAAAVNRSGLKYQANPAVFKAVYEQKLDLADADEFRKWATAQKTFDGKRLWVAYQQPQTATVAKNMQKLTETY
QISGTPTVIVGGKYQIKFDKGFPQGMKTMDELIAKVRAERGLKTH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=779983 PJU73_RS00610 WP_237090958.1 117048..117665(+) (dsbA1) [Neisseria lisongii strain ZJ106]
ATGAAAAAAGCAGCATGGCTGGTGCTTTTACCTGCTTTGGCTCAGGCAGCAGTGGTGGGCGAGGATTACACGGTTTTGGC
AAAACCGATTCCGCAGCTTCAGCCCAATAAAGTGGAAGTGTTGGAATTTTTCGGCTATTTCTGCGTGCATTGCTACCATC
TTGATCCGATTCTGTTGAAACACAGCCGCTCGTTTGCGCCCGATACCTATCTGCGCACCGAGCATGTGGTGTGGCAGCCG
GATATGCTGGGCTTGGCAAAAGTAGCGGCGGCGGTGAACCGTTCGGGTCTGAAATATCAGGCGAATCCGGCGGTGTTCAA
AGCGGTTTACGAACAGAAACTGGATTTGGCCGATGCTGATGAGTTCCGCAAATGGGCAACGGCACAAAAAACCTTTGACG
GCAAACGCCTTTGGGTAGCCTATCAGCAGCCGCAAACGGCAACCGTTGCCAAAAATATGCAGAAGCTGACCGAAACCTAC
CAAATTAGCGGCACACCGACAGTGATTGTCGGCGGCAAATACCAAATCAAATTCGATAAAGGTTTCCCGCAAGGCATGAA
AACGATGGACGAGCTGATTGCCAAAGTGCGTGCCGAACGGGGGTTGAAAACGCATTAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(37-174)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

54.595

90.244

0.493
  dsbA2 Neisseria meningitidis MC58

52.486

88.293

0.463