Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   QYM42_RS02125 Genome accession   NZ_CP129526
Coordinates   422723..423505 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis strain ZZ-2     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 417723..428505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYM42_RS02100 (QYM42_02100) vicX 417747..418559 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  QYM42_RS02105 (QYM42_02105) vicK 418729..420171 (-) 1443 WP_010905315.1 cell wall metabolism sensor histidine kinase WalK Regulator
  QYM42_RS02110 (QYM42_02110) yycF 420164..420865 (-) 702 WP_003131580.1 response regulator YycF -
  QYM42_RS02115 (QYM42_02115) tmk 421043..421678 (+) 636 WP_012897230.1 dTMP kinase -
  QYM42_RS02120 (QYM42_02120) - 421811..422671 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  QYM42_RS02125 (QYM42_02125) yaaT 422723..423505 (+) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  QYM42_RS02130 (QYM42_02130) yabA 423498..423824 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  QYM42_RS02135 (QYM42_02135) rsmI 423824..424699 (+) 876 WP_251900140.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QYM42_RS02140 (QYM42_02140) - 424776..424967 (-) 192 WP_012897234.1 hypothetical protein -
  QYM42_RS02145 (QYM42_02145) mvk 425030..425962 (-) 933 WP_003131564.1 mevalonate kinase -
  QYM42_RS02150 (QYM42_02150) mvaD 426268..427224 (+) 957 WP_058206246.1 diphosphomevalonate decarboxylase -
  QYM42_RS02155 (QYM42_02155) - 427211..428200 (+) 990 WP_012897236.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=779682 QYM42_RS02125 WP_010905316.1 422723..423505(+) (yaaT) [Lactococcus lactis strain ZZ-2]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=779682 QYM42_RS02125 WP_010905316.1 422723..423505(+) (yaaT) [Lactococcus lactis strain ZZ-2]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTGCGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388