Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   POF65_RS09510 Genome accession   NZ_CP116706
Coordinates   1871638..1872897 (-) Length   419 a.a.
NCBI ID   WP_000900651.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain A909 sCas9     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1866638..1877897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF65_RS09500 (POF65_09500) - 1868984..1869568 (-) 585 WP_000842266.1 glycoside hydrolase family 73 protein -
  POF65_RS09505 (POF65_09505) - 1869693..1871546 (-) 1854 WP_000814043.1 proline--tRNA ligase -
  POF65_RS09510 (POF65_09510) eeP 1871638..1872897 (-) 1260 WP_000900651.1 RIP metalloprotease RseP Regulator
  POF65_RS09515 (POF65_09515) - 1872928..1873722 (-) 795 WP_000664683.1 phosphatidate cytidylyltransferase -
  POF65_RS09520 (POF65_09520) - 1873737..1874489 (-) 753 WP_000469560.1 isoprenyl transferase -
  POF65_RS09525 (POF65_09525) yajC 1874655..1874996 (-) 342 WP_000056607.1 preprotein translocase subunit YajC -
  POF65_RS09530 (POF65_09530) - 1875073..1875417 (-) 345 WP_000286789.1 thioredoxin domain-containing protein -
  POF65_RS09535 (POF65_09535) - 1875569..1877038 (-) 1470 WP_000468678.1 IS1182-like element IS1563 family transposase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46030.99 Da        Isoelectric Point: 9.9616

>NTDB_id=779232 POF65_RS09510 WP_000900651.1 1871638..1872897(-) (eeP) [Streptococcus agalactiae strain A909 sCas9]
MLGILTFIIIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEIRIAPLDVQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTSHLEKNQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGFKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYITLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=779232 POF65_RS09510 WP_000900651.1 1871638..1872897(-) (eeP) [Streptococcus agalactiae strain A909 sCas9]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATTTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAGCCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATCAATGTAACAGCTTATGATTTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTATAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAATTCGTATTGCTCCCTTAGATGTGCAGTAT
CAGAATGCTTCTGTATGGGGGCGCTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGAGGTGTTCAAGATTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCTG
CTAGTGCAGGTTTAAAAAATAATGACCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGTCATTTAGAAAAAAACCAAAAACTTGCCCTTAAAATTAAGAGCAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTCTAAAGACAAGCTTTAAAGACA
AGCTTTTAGGTGGATTTAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCAGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCCATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTACGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTAACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(205-271)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.524

100

0.697

  eeP Streptococcus thermophilus LMD-9

69.286

100

0.695