Detailed information NTG0779012

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: QYN05_RS12895
• Genome accession: NZ_CP129406
• Coordinates: 2165974..2168811 (+)
• Length: 945 a.a.
• NCBI ID: WP_034020812.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PA272
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2160974..2173811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYN05_RS12870	pchC	2161282..2162037 (+)	756	WP_016252949.1	pyochelin biosynthesis editing thioesterase PchC	-
QYN05_RS12875	pchB	2162037..2162342 (+)	306	WP_003106950.1	isochorismate lyase PchB	-
QYN05_RS12880	pchA	2162339..2163769 (+)	1431	WP_034020815.1	isochorismate synthase PchA	-
QYN05_RS12885	ssb	2163858..2164355 (-)	498	WP_003114685.1	single-stranded DNA-binding protein	Machinery gene
QYN05_RS12890	-	2164372..2165760 (-)	1389	WP_003103910.1	MFS transporter	-
QYN05_RS12895	uvrA	2165974..2168811 (+)	2838	WP_034020812.1	excinuclease ABC subunit UvrA	Machinery gene
QYN05_RS12900	bfr	2168883..2169347 (-)	465	WP_003093668.1	bacterioferritin	-
QYN05_RS12905	katA	2169478..2170926 (-)	1449	WP_003103909.1	catalase KatA	-
QYN05_RS12910	rplQ	2171208..2171597 (-)	390	WP_003093672.1	50S ribosomal protein L17	-
QYN05_RS12915	rpoA	2171641..2172642 (-)	1002	WP_003093675.1	DNA-directed RNA polymerase subunit alpha	-
QYN05_RS12920	rpsD	2172665..2173285 (-)	621	WP_003093678.1	30S ribosomal protein S4	-
QYN05_RS12925	rpsK	2173302..2173691 (-)	390	WP_003093689.1	30S ribosomal protein S11	-

Sequence

Protein

• Length: 945 a.a.
• Molecular weight: 104507.10 Da
• Isoelectric Point: 6.6074

>NTDB_id=779012 QYN05_RS12895 WP_034020812.1 2165974..2168811(+) (uvrA) [Pseudomonas aeruginosa strain PA272]
MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSMMEKPDVDTIEGLS
PAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRCPDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKG
EHLAVFDEMRAQGFVRARVDGKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALSLADGIALVAPMDED
EDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDARRVVNGELTLAEGAIRGWDRRNVYYFQM
LGSLAQHYGFSLEEPFDELGAEHQKVVLYGSGRENVDFRYLNDRGDIVKRSHPFEGILPNLERRYRETESATVREELAKF
LSTQPCPDCHGTRLRREARHVWVGDRTLPAITAMPVGEACEYAAGLSLTGRRGEIAAKILKEIRDRLQFLVNVGLDYLTL
DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLTHLRNLGNTVIVVEHDEDAIRLADYVVDI
GPGAGVHGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKIAVPAKRTPRDKKRLLKLKGARGNNLQNVNLEIPVGLFTCITG
VSGSGKSTLINNTLFPITATALNGATTLEVAPYDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPE
ARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEIRYKGKSIHEVLEMTIEEAREFF
DAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRD
HGNTVVVIEHNLDVIKTADWLVDLGPEGGSKGGQIIANGTPEQVAEMSQSHTGHFLKPLLERDRA

Nucleotide

• Length: 2838 bp

>NTDB_id=779012 QYN05_RS12895 WP_034020812.1 2165974..2168811(+) (uvrA) [Pseudomonas aeruginosa strain PA272]
GTGGATAAGATCCTGATTCGTGGGGCGCGTACCCACAACCTGAAGAACGTCGACCTCACACTGCCACGCGACAAACTGAT
CGTGATCACCGGTCTTTCCGGTTCCGGCAAGTCTTCCCTGGCTTTCGACACGCTCTATGCGGAAGGCCAGCGGCGCTACG
TGGAATCCCTCTCGGCCTACGCCCGGCAGTTCCTGTCGATGATGGAGAAGCCGGACGTGGACACCATCGAAGGGCTGTCG
CCGGCGATTTCCATCGAACAGAAGTCCACTTCCCACAACCCACGCTCCACCGTGGGTACGATCACCGAGATCTACGACTA
CCTGCGCCTGCTTTATGCCCGCGTCGGTACCCCGCGCTGCCCGGACCACGACATCCCGCTGGAGGCGCAGACCGTCAGCC
AGATGGTCGACCAGGTCCTGGCCCTGCCGGAAGGCAGCAAGCTGATGCTGCTGGCGCCGGTGATCCGCGAGCGCAAGGGC
GAGCACCTGGCGGTGTTCGACGAGATGCGCGCGCAGGGCTTCGTCCGCGCCCGGGTCGACGGCAAGCTCTACGAACTCGA
CGAAGTGCCGAAACTGGATAAGCAGAAGAAGCACAGCATCGATGTGGTGGTGGACCGCTTCAAGGTTCGCGCGGACCTCC
AGCAACGCCTGGCCGAGTCGTTCGAGACCGCCCTGTCCCTGGCCGACGGTATCGCCCTGGTAGCACCGATGGACGAGGAC
GAGGATGTCGAGGAGATCATCTTCTCGGCGCGCTTCGCCTGCCCGGTCTGCGGCCACTCTATCAGCGAGCTGGAACCCAA
GCTGTTCTCCTTCAACAACCCGGCCGGCGCCTGTCCGACCTGCGACGGCCTCGGCGTGAAGCAATTCTTCGACGCGCGCC
GGGTGGTCAACGGCGAGTTGACCCTGGCCGAGGGCGCGATCCGCGGCTGGGACCGGCGCAACGTCTATTACTTCCAGATG
CTCGGTTCGCTGGCCCAGCATTACGGCTTCAGCCTGGAAGAACCCTTCGACGAACTCGGCGCCGAACACCAGAAGGTGGT
GCTCTACGGCTCCGGCCGGGAAAACGTCGACTTCCGCTATCTCAACGACCGCGGCGACATCGTCAAGCGCTCGCACCCCT
TCGAAGGCATCCTGCCGAACCTTGAGCGGCGCTACCGCGAGACCGAGTCGGCCACGGTCCGCGAGGAGCTGGCCAAGTTC
CTCAGCACCCAGCCCTGCCCGGATTGCCACGGTACCCGCCTGCGCCGCGAGGCGCGGCATGTGTGGGTCGGCGACCGGAC
GCTGCCGGCGATCACCGCGATGCCGGTCGGCGAAGCCTGCGAGTATGCCGCCGGACTCAGCCTGACCGGCCGCCGTGGCG
AGATCGCGGCGAAGATCCTCAAGGAAATCCGCGACCGCCTGCAATTCCTGGTCAACGTCGGCCTCGACTACCTGACCCTC
GACCGCAGCGCCGACACCCTGTCCGGCGGCGAAGCCCAGCGCATCCGCCTGGCCAGCCAGATCGGCGCCGGCCTGGTGGG
AGTGATGTACATCCTCGACGAACCCTCGATCGGCCTGCACCAACGCGACAACGAGCGCCTGCTCGGCACCCTCACCCACC
TGCGCAACCTCGGCAACACGGTGATCGTGGTCGAGCACGACGAGGACGCGATCCGACTCGCCGACTACGTCGTCGACATC
GGTCCGGGCGCCGGCGTGCACGGCGGCCAGGTAGTGGCGGAAGGTACGCCCGACCAGGTGATGAACCACCCCGACTCGCT
GACCGGCAAGTACCTTTCCGGGCGCAAGAAAATCGCGGTTCCGGCCAAGCGCACCCCGCGCGACAAGAAGAGGCTGCTGA
AGCTGAAAGGCGCCCGCGGCAACAACCTGCAGAACGTCAACCTGGAAATCCCGGTCGGCCTGTTCACCTGCATCACCGGG
GTCTCGGGCTCCGGCAAGTCGACGCTGATCAACAACACCCTGTTCCCGATCACCGCCACCGCGCTGAACGGCGCGACTAC
CCTGGAAGTGGCGCCGTATGACTCGTTCGACGGCCTGCAGCACCTGGACAAGGTGGTCGACATCGACCAGAGCCCGATCG
GTCGTACCCCGCGCTCCAACCCGGCGACCTATACCGGCCTGTTCACGCCGATCCGCGAACTGTTCTCCGGCGTGCCGGAG
GCCCGCTCGCGCGGCTACGGTCCCGGCCGCTTCTCGTTCAACGTCAAGGGCGGCCGTTGCGAGGCCTGCCAGGGCGACGG
CGTGATCAAGGTGGAGATGCACTTCCTGCCGGACATCTACGTTCCCTGCGATGTCTGCAAGGGCAAGCGCTACAACCGCG
AGACCCTGGAGATCCGCTACAAGGGCAAGAGCATCCACGAGGTGCTGGAGATGACCATCGAGGAAGCCCGCGAGTTCTTC
GACGCCGTCCCCGCCCTGGCGCGCAAGCTGCAGACGCTGATGGACGTCGGCCTGTCCTACATCAAGCTGGGCCAGAGCGC
GACCACCCTCTCGGGCGGCGAGGCACAACGGGTCAAGCTGTCCCGCGAGCTGTCCAAGCGCGATACCGGCAAGACCCTGT
ACATCCTCGACGAACCGACCACCGGCCTGCATTTCGCCGACATCCAGCAACTGCTCGACGTGCTCCACCGCCTGCGCGAC
CACGGCAACACCGTGGTGGTGATCGAGCACAACCTGGACGTGATCAAGACCGCCGACTGGCTGGTCGACCTCGGCCCCGA
GGGCGGCTCCAAGGGCGGCCAGATCATCGCCAACGGCACGCCGGAGCAGGTGGCCGAGATGTCCCAGTCGCACACCGGCC
ACTTCCTCAAGCCGTTGCTGGAACGCGATCGCGCCTGA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-399)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.339	100	0.575
uvrA	Streptococcus pneumoniae TIGR4	57.339	100	0.575
uvrA	Streptococcus pneumoniae D39	57.339	100	0.575