Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PML78_RS02250 Genome accession   NZ_CP116583
Coordinates   480775..482043 (-) Length   422 a.a.
NCBI ID   WP_016172216.1    Uniprot ID   -
Organism   Enterococcus dispar strain K205-4b     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 475775..487043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PML78_RS02245 (PML78_02245) - 476185..480534 (-) 4350 WP_016172215.1 PolC-type DNA polymerase III -
  PML78_RS02250 (PML78_02250) eeP 480775..482043 (-) 1269 WP_016172216.1 RIP metalloprotease RseP Regulator
  PML78_RS02255 (PML78_02255) - 482277..483077 (-) 801 WP_271858198.1 phosphatidate cytidylyltransferase -
  PML78_RS02260 (PML78_02260) - 483108..483893 (-) 786 WP_016172218.1 isoprenyl transferase -
  PML78_RS02265 (PML78_02265) frr 484176..484733 (-) 558 WP_016172219.1 ribosome recycling factor -
  PML78_RS02270 (PML78_02270) pyrH 484735..485457 (-) 723 WP_016172220.1 UMP kinase -
  PML78_RS02275 (PML78_02275) tsf 485606..486487 (-) 882 WP_271858201.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45925.59 Da        Isoelectric Point: 6.3653

>NTDB_id=778609 PML78_RS02250 WP_016172216.1 480775..482043(-) (eeP) [Enterococcus dispar strain K205-4b]
MKTLITFILVFSVIVIIHEFGHYFFAKRAGILVREFAIGMGPKIWGHQGKDGTTFTLRALPIGGYVRMAGNGEDEVELTP
GMPIGLVLNDEGKVKQINTSSKIQLATAFPFELAEFDLEDKLFVSGYQNGDESQLVSYAVLHDTTIIESDGVEVRIAPRD
VQFQSAKLWQRMLTNFAGPMNNFLLAIVLFIIITFLQGGVPITDTNKIGTISDNSPAQIANLKAGDAIESVDGQKISSWE
DLTAAITSSKNEVLHFTIKRNNKTITAEVTPKKEKIDGQEVVRIGVQAPMDTSVIGKLTGGIKQAANSSVQLLRALGNLI
AKPDINKLGGPVAMFQMSSEAAKQGPLTVMVLMAVISMNLGVMNLLPIPALDGGKIVLNIIEGVRGKPLSQEKEGILTLI
GFGFLLLLMVLVTWNDIQRWFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=778609 PML78_RS02250 WP_016172216.1 480775..482043(-) (eeP) [Enterococcus dispar strain K205-4b]
ATGAAGACACTTATTACATTTATTCTCGTATTTAGTGTAATTGTAATTATACACGAATTTGGTCACTACTTTTTTGCCAA
AAGAGCTGGTATTTTAGTACGGGAATTTGCGATTGGAATGGGACCAAAAATTTGGGGACATCAAGGGAAAGATGGCACCA
CATTTACTTTACGCGCACTACCAATTGGTGGTTATGTCCGAATGGCCGGTAATGGTGAAGACGAAGTAGAGTTAACCCCT
GGGATGCCAATTGGCCTTGTTTTAAATGATGAAGGTAAAGTAAAACAGATTAATACTAGTAGTAAAATTCAATTGGCAAC
CGCCTTTCCTTTTGAATTGGCTGAATTTGATTTAGAAGATAAACTCTTTGTCTCTGGTTATCAAAATGGCGATGAAAGTC
AGCTTGTGTCATATGCTGTTTTACATGATACAACGATTATTGAATCTGATGGCGTTGAGGTACGAATTGCACCACGGGAT
GTACAATTTCAATCAGCCAAGCTATGGCAACGAATGTTGACTAATTTTGCAGGTCCCATGAATAATTTTTTATTAGCAAT
TGTTTTGTTTATCATTATTACCTTCTTGCAAGGTGGTGTGCCAATAACCGATACTAATAAAATCGGTACTATTAGTGACA
ATTCGCCAGCACAAATAGCAAACTTAAAAGCAGGCGATGCTATTGAAAGTGTTGACGGACAAAAGATTTCTTCTTGGGAG
GATCTAACAGCGGCGATTACGAGCAGCAAAAATGAAGTTTTACATTTTACCATTAAAAGAAATAATAAAACAATTACTGC
AGAAGTTACTCCTAAAAAAGAAAAAATTGATGGTCAAGAAGTTGTTCGGATTGGTGTTCAAGCCCCGATGGATACTAGCG
TAATAGGGAAGTTAACTGGAGGAATTAAACAAGCAGCAAATAGCTCAGTACAATTGTTGCGAGCTCTAGGAAATCTAATT
GCTAAACCCGATATCAATAAATTAGGCGGCCCTGTTGCGATGTTTCAAATGTCATCCGAAGCGGCTAAACAAGGTCCTTT
GACGGTAATGGTATTAATGGCGGTGATTTCCATGAACTTAGGAGTAATGAATTTATTGCCAATTCCAGCGTTAGATGGTG
GGAAAATTGTGCTCAATATCATCGAAGGTGTTCGTGGCAAACCCCTTAGTCAGGAAAAAGAAGGAATTTTAACTTTAATT
GGCTTTGGCTTTTTACTCCTACTGATGGTTTTAGTAACGTGGAATGATATTCAACGTTGGTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(199-270)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

50.467

100

0.512
  eeP Streptococcus thermophilus LMD-9

50.234

100

0.509