Detailed information NTG0778331

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QYC34_RS15810
• Genome accession: NZ_CP129338
• Coordinates: 2887616..2888881 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM126725
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2882616..2893881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYC34_RS15790 (QYC34_15790)	yrrB	2883987..2884607 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
QYC34_RS15795 (QYC34_15795)	mnmA	2884693..2885808 (-)	1116	WP_046160682.1	tRNA 2-thiouridine(34) synthase MnmA	-
QYC34_RS15800 (QYC34_15800)	iscSA	2885839..2886978 (-)	1140	WP_046160683.1	cysteine desulfurase family protein	-
QYC34_RS15805 (QYC34_15805)	cymR	2886997..2887413 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QYC34_RS15810 (QYC34_15810)	rarA	2887616..2888881 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
QYC34_RS15815 (QYC34_15815)	tcdA	2888921..2889685 (-)	765	WP_046160684.1	ThiF family adenylyltransferase	-
QYC34_RS15825 (QYC34_15825)	aspS	2890020..2891798 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
QYC34_RS15830 (QYC34_15830)	hisS	2891812..2893086 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
QYC34_RS15835 (QYC34_15835)	yrzK	2893468..2893638 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=778331 QYC34_RS15810 WP_015714437.1 2887616..2888881(+) (rarA) [Bacillus subtilis strain SRCM126725]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=778331 QYC34_RS15810 WP_015714437.1 2887616..2888881(+) (rarA) [Bacillus subtilis strain SRCM126725]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATTTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998