Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   QYC34_RS01380 Genome accession   NZ_CP129338
Coordinates   259540..260367 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain SRCM126725     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 254540..265367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYC34_RS01355 (QYC34_01355) efpO 255603..257045 (+) 1443 WP_072174174.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  QYC34_RS01360 (QYC34_01360) tmk 257042..257680 (+) 639 WP_015253015.1 dTMP kinase -
  QYC34_RS01365 (QYC34_01365) darA 257754..258083 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  QYC34_RS01370 (QYC34_01370) yaaR 258096..258536 (+) 441 WP_009966249.1 YaaR family protein -
  QYC34_RS01375 (QYC34_01375) holB 258548..259537 (+) 990 WP_153952900.1 DNA polymerase III subunit delta' -
  QYC34_RS01380 (QYC34_01380) yaaT 259540..260367 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  QYC34_RS01385 (QYC34_01385) yabA 260382..260741 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  QYC34_RS01390 (QYC34_01390) trmNF 260800..261543 (+) 744 WP_077671692.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  QYC34_RS01395 (QYC34_01395) yazA 261530..261829 (+) 300 WP_069837179.1 GIY-YIG nuclease family protein -
  QYC34_RS01400 (QYC34_01400) rsmI 261804..262682 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QYC34_RS01405 (QYC34_01405) abrB 262731..263021 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=778230 QYC34_RS01380 WP_003226767.1 259540..260367(+) (yaaT) [Bacillus subtilis strain SRCM126725]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=778230 QYC34_RS01380 WP_003226767.1 259540..260367(+) (yaaT) [Bacillus subtilis strain SRCM126725]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996