Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PML82_RS04905 Genome accession   NZ_CP116514
Coordinates   1014936..1016204 (+) Length   422 a.a.
NCBI ID   WP_002337236.1    Uniprot ID   -
Organism   Enterococcus faecium strain K195-6b     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1009936..1021204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PML82_RS04880 (PML82_04880) pyrH 1010624..1011346 (+) 723 WP_002293877.1 UMP kinase -
  PML82_RS04885 (PML82_04885) frr 1011349..1011906 (+) 558 WP_002293875.1 ribosome recycling factor -
  PML82_RS04890 (PML82_04890) - 1012070..1013029 (+) 960 WP_002301399.1 IS30 family transposase -
  PML82_RS04895 (PML82_04895) - 1013166..1013978 (+) 813 WP_002294134.1 isoprenyl transferase -
  PML82_RS04900 (PML82_04900) - 1013975..1014775 (+) 801 WP_002294135.1 phosphatidate cytidylyltransferase -
  PML82_RS04905 (PML82_04905) eeP 1014936..1016204 (+) 1269 WP_002337236.1 RIP metalloprotease RseP Regulator
  PML82_RS04910 (PML82_04910) - 1016272..1017981 (+) 1710 WP_002297401.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46103.58 Da        Isoelectric Point: 4.9270

>NTDB_id=777763 PML82_RS04905 WP_002337236.1 1014936..1016204(+) (eeP) [Enterococcus faecium strain K195-6b]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVIKKNPGKTLDFKIEREGQVQSVDVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=777763 PML82_RS04905 WP_002337236.1 1014936..1016204(+) (eeP) [Enterococcus faecium strain K195-6b]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CGTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTAAGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.206

100

0.55
  eeP Streptococcus thermophilus LMG 18311

53.972

100

0.547