Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QWI19_RS20735 Genome accession   NZ_CP129123
Coordinates   4008158..4008952 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain 6D1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4003158..4013952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS20710 - 4004272..4004955 (-) 684 WP_048654834.1 response regulator transcription factor -
  QWI19_RS20715 - 4005167..4006066 (+) 900 WP_015250814.1 PepSY domain-containing protein -
  QWI19_RS20720 - 4006227..4006727 (+) 501 WP_015250813.1 PepSY domain-containing protein -
  QWI19_RS20725 - 4006724..4006853 (-) 130 Protein_4029 hypothetical protein -
  QWI19_RS20730 htrA 4006874..4008076 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  QWI19_RS20735 vicX 4008158..4008952 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  QWI19_RS20740 walI 4008974..4009816 (-) 843 WP_015250811.1 WalRK two-component regulatory system regulator WalI -
  QWI19_RS20745 walH 4009803..4011170 (-) 1368 WP_015250810.1 WalRK two-component regulatory system regulator WalH -
  QWI19_RS20750 walK 4011160..4012995 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  QWI19_RS20755 walR 4013003..4013710 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=777085 QWI19_RS20735 WP_003226939.1 4008158..4008952(-) (vicX) [Bacillus subtilis strain 6D1]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=777085 QWI19_RS20735 WP_003226939.1 4008158..4008952(-) (vicX) [Bacillus subtilis strain 6D1]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCAAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53