Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   QWI19_RS19070 Genome accession   NZ_CP129123
Coordinates   3674391..3674765 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain 6D1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3669391..3679765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS19045 - 3669554..3669715 (-) 162 WP_003227632.1 hypothetical protein -
  QWI19_RS19050 glpX 3669930..3670895 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  QWI19_RS19055 murAB 3670926..3672215 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  QWI19_RS19060 fsa 3672595..3673233 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  QWI19_RS19065 fbaA 3673353..3674210 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  QWI19_RS19070 letA 3674391..3674765 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  QWI19_RS19075 ywjG 3674931..3675452 (+) 522 WP_015251005.1 DUF2529 domain-containing protein -
  QWI19_RS19080 pyrG 3675534..3677141 (-) 1608 WP_015251004.1 glutamine hydrolyzing CTP synthase -
  QWI19_RS19085 rpoE 3677383..3677904 (-) 522 WP_015251003.1 DNA-directed RNA polymerase subunit delta -
  QWI19_RS19090 acdA 3678087..3679226 (-) 1140 WP_015251002.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=777078 QWI19_RS19070 WP_003227621.1 3674391..3674765(-) (letA) [Bacillus subtilis strain 6D1]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=777078 QWI19_RS19070 WP_003227621.1 3674391..3674765(-) (letA) [Bacillus subtilis strain 6D1]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363