Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PIB33_RS06130 Genome accession   NZ_CP116391
Coordinates   1191270..1191926 (+) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis strain GXD-20     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1186270..1196926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PIB33_RS06100 (PIB33_06100) oppF 1186733..1187650 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  PIB33_RS06105 (PIB33_06105) yjbB 1187758..1188975 (+) 1218 WP_074794275.1 MFS transporter -
  PIB33_RS06110 (PIB33_06110) yjbC 1189140..1189718 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  PIB33_RS06115 (PIB33_06115) spx 1189899..1190294 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  PIB33_RS06120 (PIB33_06120) yjbE 1190337..1190993 (-) 657 WP_003232944.1 TerC family protein -
  PIB33_RS06125 (PIB33_06125) - 1191163..1191303 (+) 141 WP_119122854.1 hypothetical protein -
  PIB33_RS06130 (PIB33_06130) mecA 1191270..1191926 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  PIB33_RS06135 (PIB33_06135) - 1191921..1192043 (-) 123 WP_003245684.1 hypothetical protein -
  PIB33_RS06140 (PIB33_06140) coiA 1192087..1193238 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  PIB33_RS06145 (PIB33_06145) pepF 1193468..1195297 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  PIB33_RS06150 (PIB33_06150) - 1195335..1195502 (-) 168 WP_003244944.1 hypothetical protein -
  PIB33_RS06155 (PIB33_06155) spxH 1195816..1196715 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=777006 PIB33_RS06130 WP_003245194.1 1191270..1191926(+) (mecA) [Bacillus subtilis strain GXD-20]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=777006 PIB33_RS06130 WP_003245194.1 1191270..1191926(+) (mecA) [Bacillus subtilis strain GXD-20]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1