Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PIB33_RS02195 Genome accession   NZ_CP116391
Coordinates   431900..432850 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain GXD-20     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426900..437850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PIB33_RS02170 (PIB33_02170) rapC 428360..429508 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  PIB33_RS02175 (PIB33_02175) phrC 429492..429614 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PIB33_RS02180 (PIB33_02180) yczM 429714..429803 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  PIB33_RS02185 (PIB33_02185) yczN 429885..429998 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  PIB33_RS02190 (PIB33_02190) thrD 430151..431515 (-) 1365 WP_015715246.1 aspartate kinase -
  PIB33_RS02195 (PIB33_02195) ceuB 431900..432850 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  PIB33_RS02200 (PIB33_02200) yclO 432843..433790 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  PIB33_RS02205 (PIB33_02205) yclP 433784..434542 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  PIB33_RS02210 (PIB33_02210) yclQ 434564..435517 (+) 954 WP_015715247.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PIB33_RS02215 (PIB33_02215) cdaE 435564..436982 (-) 1419 WP_015715248.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=776992 PIB33_RS02195 WP_014475804.1 431900..432850(+) (ceuB) [Bacillus subtilis strain GXD-20]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=776992 PIB33_RS02195 WP_014475804.1 431900..432850(+) (ceuB) [Bacillus subtilis strain GXD-20]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGATACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525