Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QWH96_RS02890 Genome accession   NZ_CP128987
Coordinates   545489..546298 (+) Length   269 a.a.
NCBI ID   WP_003057211.1    Uniprot ID   A0ABU0A532
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NS3396     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 540489..551298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWH96_RS02865 (QWH96_02870) - 540862..541563 (-) 702 WP_003057191.1 amino acid ABC transporter permease -
  QWH96_RS02870 (QWH96_02875) - 541577..542377 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  QWH96_RS02875 (QWH96_02880) - 542377..543171 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  QWH96_RS02880 (QWH96_02885) yycF 543430..544140 (+) 711 WP_003057225.1 response regulator YycF -
  QWH96_RS02885 (QWH96_02890) vicK 544133..545485 (+) 1353 WP_014612101.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QWH96_RS02890 (QWH96_02895) vicX 545489..546298 (+) 810 WP_003057211.1 MBL fold metallo-hydrolase Regulator
  QWH96_RS02895 (QWH96_02900) - 546379..547254 (-) 876 WP_046177434.1 helix-turn-helix transcriptional regulator -
  QWH96_RS02900 (QWH96_02905) - 547784..548563 (+) 780 WP_049520212.1 hypothetical protein -
  QWH96_RS02905 (QWH96_02910) - 549007..549750 (+) 744 WP_141668973.1 hypothetical protein -
  QWH96_RS02910 (QWH96_02915) - 549928..550596 (+) 669 WP_065359331.1 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30191.40 Da        Isoelectric Point: 6.0739

>NTDB_id=776830 QWH96_RS02890 WP_003057211.1 545489..546298(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQFMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=776830 QWH96_RS02890 WP_003057211.1 545489..546298(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTTATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766