Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PJW01_RS03180 Genome accession   NZ_CP116325
Coordinates   568941..569624 (+) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis strain BLB1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 563941..574624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJW01_RS03160 (PJW01_03160) - 565002..566648 (+) 1647 WP_000727248.1 peptide ABC transporter substrate-binding protein -
  PJW01_RS03165 (PJW01_03165) - 566679..566882 (-) 204 WP_000559971.1 hypothetical protein -
  PJW01_RS03170 (PJW01_03170) spx 567476..567871 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  PJW01_RS03175 (PJW01_03175) - 567921..568595 (-) 675 WP_000362615.1 TerC family protein -
  PJW01_RS03180 (PJW01_03180) mecA 568941..569624 (+) 684 WP_000350716.1 adaptor protein MecA Regulator
  PJW01_RS03185 (PJW01_03185) - 569697..571241 (+) 1545 WP_000799197.1 cardiolipin synthase -
  PJW01_RS03190 (PJW01_03190) - 571322..572566 (+) 1245 WP_000628331.1 competence protein CoiA -
  PJW01_RS03195 (PJW01_03195) pepF 572618..574444 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=776603 PJW01_RS03180 WP_000350716.1 568941..569624(+) (mecA) [Bacillus thuringiensis strain BLB1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=776603 PJW01_RS03180 WP_000350716.1 568941..569624(+) (mecA) [Bacillus thuringiensis strain BLB1]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564