Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PJW05_RS01625 Genome accession   NZ_CP116304
Coordinates   337811..338218 (+) Length   135 a.a.
NCBI ID   WP_003455569.1    Uniprot ID   A0AAD1BY44
Organism   Pseudomonas sp. Q1-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 332811..343218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJW05_RS01595 - 332906..333913 (-) 1008 WP_271410201.1 aspartate carbamoyltransferase catalytic subunit -
  PJW05_RS01600 pyrR 333951..334463 (-) 513 WP_271410202.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PJW05_RS01605 ruvX 334486..334926 (-) 441 WP_271410203.1 Holliday junction resolvase RuvX -
  PJW05_RS01610 - 334926..335492 (-) 567 WP_271410204.1 YqgE/AlgH family protein -
  PJW05_RS01615 - 335592..336485 (-) 894 WP_271410205.1 energy transducer TonB -
  PJW05_RS01620 gshB 336573..337544 (-) 972 WP_271410206.1 glutathione synthase -
  PJW05_RS01625 pilG 337811..338218 (+) 408 WP_003455569.1 twitching motility response regulator PilG Regulator
  PJW05_RS01630 pilH 338265..338630 (+) 366 WP_271410207.1 twitching motility response regulator PilH -
  PJW05_RS01635 - 338686..339222 (+) 537 WP_271410208.1 chemotaxis protein CheW -
  PJW05_RS01640 - 339364..341412 (+) 2049 WP_271410209.1 methyl-accepting chemotaxis protein -
  PJW05_RS01645 - 341475..342335 (+) 861 WP_271412160.1 protein-glutamate O-methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7128

>NTDB_id=776497 PJW05_RS01625 WP_003455569.1 337811..338218(+) (pilG) [Pseudomonas sp. Q1-7]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADSHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=776497 PJW05_RS01625 WP_003455569.1 337811..338218(+) (pilG) [Pseudomonas sp. Q1-7]
ATGGAACAGCATTCCGAGGGTTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCCGAGACTTTGCT
CAAGAAGGTGGGGTGCGAGGTCATCACTGCAGTCGATGGTTTCGATGCCTTGGCCAAGATCGCCGATTCCCACCCGAACA
TCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCTTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGTTCCGATCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCGATCAAGACTCACGTCCCTGATTTCACCCCGGTGGAGCAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

92.593

0.711
  vicR Streptococcus mutans UA159

41.27

93.333

0.385