Detailed information NTG0776264

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PHA49_RS05395
• Genome accession: NZ_CP116234
• Coordinates: 1132985..1133785 (-)
• Length: 266 a.a.
• NCBI ID: WP_271330496.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain H390d
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1127985..1138785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PHA49_RS05350 (PHA49_05350)	-	1128738..1129523 (-)	786	WP_271330491.1	hypothetical protein	-
PHA49_RS05355 (PHA49_05355)	-	1129523..1129909 (-)	387	WP_271331162.1	DUF1294 domain-containing protein	-
PHA49_RS05360 (PHA49_05360)	-	1130245..1130406 (-)	162	WP_229763027.1	lysozyme	-
PHA49_RS05365 (PHA49_05365)	-	1130426..1130671 (-)	246	WP_271330492.1	lysozyme	-
PHA49_RS05370 (PHA49_05370)	-	1130721..1130903 (-)	183	WP_271330493.1	lysozyme	-
PHA49_RS05375 (PHA49_05375)	-	1130914..1131474 (-)	561	WP_088357200.1	hypothetical protein	-
PHA49_RS05380 (PHA49_05380)	-	1131458..1131796 (-)	339	WP_000699911.1	hypothetical protein	-
PHA49_RS05385 (PHA49_05385)	-	1131980..1132468 (-)	489	WP_271330494.1	tetratricopeptide repeat protein	-
PHA49_RS05390 (PHA49_05390)	dprB	1132584..1132988 (-)	405	WP_271330495.1	Holliday junction resolvase RuvX	Machinery gene
PHA49_RS05395 (PHA49_05395)	dprA	1132985..1133785 (-)	801	WP_271330496.1	DNA-processing protein DprA	Machinery gene
PHA49_RS05400 (PHA49_05400)	minE	1133797..1134030 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
PHA49_RS05405 (PHA49_05405)	minD	1134027..1134833 (-)	807	WP_001019098.1	septum site-determining protein MinD	-
PHA49_RS05410 (PHA49_05410)	ilvC	1134857..1135849 (-)	993	WP_271330497.1	ketol-acid reductoisomerase	-
PHA49_RS05420 (PHA49_05420)	-	1136097..1136879 (+)	783	WP_271330498.1	NAD+ synthase	-
PHA49_RS05425 (PHA49_05425)	-	1136876..1137814 (+)	939	WP_271330499.1	tetraacyldisaccharide 4'-kinase	-
PHA49_RS05430 (PHA49_05430)	pseH	1137747..1138289 (-)	543	WP_154474260.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29795.76 Da
• Isoelectric Point: 9.1549

>NTDB_id=776264 PHA49_RS05395 WP_271330496.1 1132985..1133785(-) (dprA) [Helicobacter pylori strain H390d]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=776264 PHA49_RS05395 WP_271330496.1 1132985..1133785(-) (dprA) [Helicobacter pylori strain H390d]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAGG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGTGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCCAAAAATCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414