Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilP   Type   Machinery gene
Locus tag   H7R46_RS01545 Genome accession   NZ_AP022302
Coordinates   326748..327275 (+) Length   175 a.a.
NCBI ID   WP_005067086.1    Uniprot ID   A0A009R948
Organism   Acinetobacter sp. BEC1-S18-ESBL-01     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 321748..332275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R46_RS01530 (BE1S18E01_02920) pilM 324261..325319 (+) 1059 WP_005067078.1 pilus assembly protein PilM Machinery gene
  H7R46_RS01535 (BE1S18E01_02930) pilN 325319..325960 (+) 642 WP_005067080.1 PilN domain-containing protein Machinery gene
  H7R46_RS01540 (BE1S18E01_02940) pilO 325957..326736 (+) 780 WP_005067082.1 type 4a pilus biogenesis protein PilO Machinery gene
  H7R46_RS01545 (BE1S18E01_02950) pilP 326748..327275 (+) 528 WP_005067086.1 pilus assembly protein PilP Machinery gene
  H7R46_RS01550 (BE1S18E01_02960) pilQ 327338..329464 (+) 2127 WP_005067089.1 type IV pilus secretin PilQ family protein Machinery gene
  H7R46_RS01555 (BE1S18E01_02970) aroK 329476..330045 (+) 570 WP_002116987.1 shikimate kinase AroK -
  H7R46_RS01560 (BE1S18E01_02980) aroB 330074..331156 (+) 1083 WP_005067096.1 3-dehydroquinate synthase -
  H7R46_RS01565 (BE1S18E01_02990) - 331173..332042 (+) 870 WP_005067097.1 hypothetical protein -

Sequence


Protein


Download         Length: 175 a.a.        Molecular weight: 19262.43 Da        Isoelectric Point: 9.7301

>NTDB_id=77624 H7R46_RS01545 WP_005067086.1 326748..327275(+) (pilP) [Acinetobacter sp. BEC1-S18-ESBL-01]
MKLKKILLSLGIGLVLVGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDHQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=77624 H7R46_RS01545 WP_005067086.1 326748..327275(+) (pilP) [Acinetobacter sp. BEC1-S18-ESBL-01]
ATGAAACTAAAGAAAATTTTACTTTCTCTGGGGATAGGCTTGGTTTTGGTTGGATGCGACTCTAGAATCGACGCCGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGAGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCATCAAATTGAGCGAGTACAGGTAGGGAATTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATCTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA

Domains


Predicted by InterproScan.

(27-170)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009R948

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

87.429

100

0.874

  comL Acinetobacter baylyi ADP1

73.964

96.571

0.714


Multiple sequence alignment